| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tbd_1266 |
|---|
| Symbol | |
|---|
| ID | 3673356 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Thiobacillus denitrificans ATCC 25259 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007404 |
|---|
| Strand | + |
|---|
| Start bp | 1329050 |
|---|
| End bp | 1331071 |
|---|
| Gene Length | 2022 bp |
|---|
| Protein Length | 673 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 67% |
|---|
| IMG OID | 637709951 |
|---|
| Product | TonB-dependent iron complex outermembrane receptor protein |
|---|
| Protein accession | YP_315024 |
|---|
| Protein GI | 74317284 |
|---|
| COG category | [P] Inorganic ion transport and metabolism |
|---|
| COG ID | [COG4771] Outer membrane receptor for ferrienterochelin and colicins |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 26 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 21 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGTCGTT TCCCGAAGCA CCTTTCCGCT CTGCCCCGCC CGAACCACGC GCCTCGCACG
TCCGGCCGCT TGCGCGCGCT GTCTTTTCTG CTGCCCGCTT TGCCCCTGCT GGCTGGCCCG
GTGCAGGCGT CGCCGCTCGA CCTCGACATC ACGCAGATGA GCCTCGAACA GCTCATGGAA
ATCAGCGTCA CCGGCGCGTC GAAGTACGAG CAGAAGCAGA GCGAGGTCGC GGCCGCCGTC
AGTGTGATCA CGCGCGACGA GATCCGGACC TACGGCTGGC GAACGCTCGC CGAGGCGCTC
GCGAGCCTGC CGGGCGTCCA CACCACCTAC GACCGCCAGT ACAGCTATGT CGGCGCCCGC
GGCTTCGGGC TGCCAGGGGA TTTCAACTCG CGTTTGCTGC TCACCGTCGA CGGCAACCGC
GCCAACGAGG TCGTGTACGG CACGGCGCTG ATGGGCCGGG AATTCCTGGT CGATCTCGAC
CTGGTCGAAC GCATCGAATA CATCCCCGGT CCAGGGGGCG CGGTGTATGG GCAAAACGCA
TTGTTCGGCG TCGTCAATGT CGTCACGCGG ACGGGAGCGG ACGTGAACGG TGGCGAGGTC
GCGCTGGCCC ACAGCACGCT CGACTCCGGC AACGAAGGCC GCGCGACCTG GGGAGGCGTG
CTCGACAACG GCGTCGATGT CCTGCTGTCC GCCAGCGCCT ATGAAGCGGA GGGGCGCGAC
CTCTACTTCG ACTACGGCAG TTCGGGTGTG GCCGGCGTCG CCTCCGGAAT GGACGGTGAG
CGCGACAAGC AGTTCTTCGG TCGCGCGGGG CGGGGACCGT GGTCGTTCGA TTTTTCCTAC
GGAGAGCGGC GCAAGGACGA CCCGATCGCC GCCTACAAAA GCGATCCGCT CGTACCGGGC
CAGTACGCCG AGGATCGCCA TCTGCTGACG CAACTGCAAT ACCAGGATCG CTTCGCCGGC
GGCACGCTGC AGGTCTCGGG TCGCCTGTTC CTCGGACGCG AGCGCTTCAG GGGGCTGTTC
CACCGTTCCG GGGACGCGCA TCGCTACGCG TTCTCGAGCG ACTGGCAGGG CATGGAGGTC
CGGCTGGTGT CGACCGCCCG GGCCGACCAC AAGACCATGT TCGGCTTCGA GTATCAGGAC
AACGCGCGCC AGGACCAGTC CGTCGTCGGC GCGGCCGCAG GCGTCATGAT TCCGGGCGCC
GGCTGGCGCG CCGGCGTTTA TGCGCAGGAC GAGTGGACCC TCACGGAGAC ATTGAGCGCG
ACGCTCGGCG TGCGCGCCGA CCGCAGCGAC GTCTCCGGCA GCGCGCTGAG TCCTCGCCTC
GCCCTGGTCT GGCAGATGAC GCCCGACACC ACGCTGAAGG CCATGTACGG ACGTGCCTTC
CGGGCGCCGA ACGCGCTCGA AAGCAATCTC GGCGACGGCG TGACCCAGCT TCCCAACCCC
AACCTCGACG CCGAGCGCAT CGATACCCTC GAGTTGCTGG CCGAGCAGCG CGTTACGCCA
AGCCTGCGCC TGCGCGCGAC GGCCTACCGC TGGACGATGC AGGGGCTGGT CACGCTTGCG
GGACTCCCCG GCGGCTTCAC CCAATATCAG AACGGCGCCG ACATCGAGGC GCGCGGGGTC
GAGCTTTCCG CCGACAAGAC CTGGGACTGG GGCGGGCGCA TTCGCGGAAG TCTCTCGCGC
CAGGATGCCT GTTACGCCGA CGGCCCGGTG TTGCTCAATT CGCCGCGGCT ACTGGGCAAG
CTCAATGTCT CGAGCCCCGT TCCGCAGACG GGCCTGCGCC TCGGCTACGA GCTTCAATAC
TCCGCGGATC GTCGCGCGGT CGACGGGACC GACGTGCCGG GTTACTGGCT TTCCAATCTC
AATCTCGTCG CCGACAAATG GGCGAGGGGG CTCGAGCTGT CGCTTGGCCT TTACAACCTT
CTCGACCGCG ACTACGCCCA GCCCGGCTCG GCGTTCAACT GGCAGAACGT TTTCGAGCAG
GACGGGCGGA GTGCACGGCT GAAGGCCGTG TACCGATTCT GA
|
|---|
| Protein sequence | MSRFPKHLSA LPRPNHAPRT SGRLRALSFL LPALPLLAGP VQASPLDLDI TQMSLEQLME
ISVTGASKYE QKQSEVAAAV SVITRDEIRT YGWRTLAEAL ASLPGVHTTY DRQYSYVGAR
GFGLPGDFNS RLLLTVDGNR ANEVVYGTAL MGREFLVDLD LVERIEYIPG PGGAVYGQNA
LFGVVNVVTR TGADVNGGEV ALAHSTLDSG NEGRATWGGV LDNGVDVLLS ASAYEAEGRD
LYFDYGSSGV AGVASGMDGE RDKQFFGRAG RGPWSFDFSY GERRKDDPIA AYKSDPLVPG
QYAEDRHLLT QLQYQDRFAG GTLQVSGRLF LGRERFRGLF HRSGDAHRYA FSSDWQGMEV
RLVSTARADH KTMFGFEYQD NARQDQSVVG AAAGVMIPGA GWRAGVYAQD EWTLTETLSA
TLGVRADRSD VSGSALSPRL ALVWQMTPDT TLKAMYGRAF RAPNALESNL GDGVTQLPNP
NLDAERIDTL ELLAEQRVTP SLRLRATAYR WTMQGLVTLA GLPGGFTQYQ NGADIEARGV
ELSADKTWDW GGRIRGSLSR QDACYADGPV LLNSPRLLGK LNVSSPVPQT GLRLGYELQY
SADRRAVDGT DVPGYWLSNL NLVADKWARG LELSLGLYNL LDRDYAQPGS AFNWQNVFEQ
DGRSARLKAV YRF
|
|---|
| |