| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tbd_1181 |
|---|
| Symbol | |
|---|
| ID | 3671542 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Thiobacillus denitrificans ATCC 25259 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007404 |
|---|
| Strand | + |
|---|
| Start bp | 1241111 |
|---|
| End bp | 1242334 |
|---|
| Gene Length | 1224 bp |
|---|
| Protein Length | 407 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 65% |
|---|
| IMG OID | 637709865 |
|---|
| Product | malate dehydrogenase (oxaloacetate-decarboxylating) |
|---|
| Protein accession | YP_314939 |
|---|
| Protein GI | 74317199 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG0281] Malic enzyme |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 20 |
|---|
| Plasmid unclonability p-value | 0.682701 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 16 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGCCAAG CCTCCCTCAA GAAAAAAGCC CTCGACTACC ACCGCCTGCC CAGACCTGGC
AAGCTCGAAG TCGTTTCGTC GAAACCCTGC GCGACCCAGG CCGACCTCTC GCTCGCCTAT
ACCCCGGGCG TCGCCCAGCC GGTGCTGGAG ATCGCGAAGA ATCCCGCCAA GGCCTACGAC
TACACCAACA AGGGCAATCT CGTCGCCGTG ATCACCGACG GTACCGCGAT TCTCGGACTC
GGTGACCGCG GCGCGCTCGC CGCGAAGCCG GTCATGGAAG GCAAGGCCGT CCTCTTCAAG
CAATTCGCCG ACATCGACGT CTACGACATC GAGGTCAATG CCAGAACGCC GCAGGACTTC
ATCAAGGTCG TCGAGGCGAT CGCGCCGACC TTCGGCGGCA TCAATCTCGA GGACATCGCC
GCACCGCACT GCTTCGAGAT CGAAGCCGCG CTGAAGAAGA AGCTCGACAT CCCGGTGTTC
CACGACGACC AGCATGGCAC CGCCGTTATC ATCTGCGCGG GGCTCATCAA CGCGCTGCAC
GTCCAGGGCA AGACGCTCGA CAGTGCGAAG ATCGTCTGCC TCGGCGCGGG CGCCGCGGGG
ATCGCGTCGA TGAAGCTCCT GCTCGCGATG GGCGCGAGGA AGTCCAACAT CCTGCTCGTC
GATTCCAAGG GCGTCGTGCA CAAGGGGCGC ACCGACCTGA ACGCCTTCAA GAAGGGTTTC
GCCCGCGCGA CCAAACTGCG TACGCTCGAG GACGCGATGA ACGGCGCCGA CGTGTTCGTC
GGCGTCTCGG GCGCCGACCT CGTGAGCCCG GCCATGGTCA AGAGCATGGC CGACAACCCG
GTGGTTTTCG CGCTCGCCAA CCCGAATCCC GAGATCTCGC CGGCGAAGGC GATGGCCGCG
CGCAGCGACC TCGTGATGGC GACCGGACGC TCCGACTATC CGAACCAGGT CAACAACGTA
CTTGGCTTTC CCTTCATCTT CCGCGGCGCG CTCGATGCGC GCGCACGCGA GATCACGCAG
GACATGCTGA TCGCCGCCGT CAACGCGCTC GCCGAACTCG CGCGCGAGCC GGTTCCGGCT
GCGGTGCTCA AGGCCTATCA GCTGAAGAAA CTCAAGTTCG GACCGGACTA CATCCTGCCC
AAGCCTTTCG ACCCGCGGCT GGCCGAGCGT GTGCCGCAGG CCGTCGCCAA GGCGGCCCGG
AAGGCCGTCA GAAAACGGCG CTGA
|
|---|
| Protein sequence | MSQASLKKKA LDYHRLPRPG KLEVVSSKPC ATQADLSLAY TPGVAQPVLE IAKNPAKAYD
YTNKGNLVAV ITDGTAILGL GDRGALAAKP VMEGKAVLFK QFADIDVYDI EVNARTPQDF
IKVVEAIAPT FGGINLEDIA APHCFEIEAA LKKKLDIPVF HDDQHGTAVI ICAGLINALH
VQGKTLDSAK IVCLGAGAAG IASMKLLLAM GARKSNILLV DSKGVVHKGR TDLNAFKKGF
ARATKLRTLE DAMNGADVFV GVSGADLVSP AMVKSMADNP VVFALANPNP EISPAKAMAA
RSDLVMATGR SDYPNQVNNV LGFPFIFRGA LDARAREITQ DMLIAAVNAL AELAREPVPA
AVLKAYQLKK LKFGPDYILP KPFDPRLAER VPQAVAKAAR KAVRKRR
|
|---|
| |