| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tbd_1124 |
|---|
| Symbol | |
|---|
| ID | 3673195 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Thiobacillus denitrificans ATCC 25259 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007404 |
|---|
| Strand | + |
|---|
| Start bp | 1178945 |
|---|
| End bp | 1179973 |
|---|
| Gene Length | 1029 bp |
|---|
| Protein Length | 342 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 69% |
|---|
| IMG OID | 637709807 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_314882 |
|---|
| Protein GI | 74317142 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG2913] Small protein A (tmRNA-binding) |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 17 |
|---|
| Plasmid unclonability p-value | 0.167997 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 16 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCCTCGTC TCCTGATCTC CGTTCTGCTT GTGGCCCTGG TCGCCGGCTG TTCGATCCCA
AAGCTCGGCC CGCATCGCAT CGACGTTCAG CAGGGCAACG CACTCGATCA GGAGAACGTC
TCCCGCCTGA AGCCCGGCCT CAACCGCTCC CAGGTTCGTT TCCTGCTCGG CACGCCGCTC
GTCGTCGACC CGTTCCGTGG CGACCGCTGG GACTACGTGT ACGTGTACTA CAAGGCGGGC
AAACTCGCCG AGCAGAAGCG GATCACGCTC CATTTCGACG GCGATACGCT GGCGCGGATC
GAGGGCGACG TGCCGCAGGA GGTCGCCGAA GCTCAGGCAC AGCAGGCGCC GCCCGCACCT
GAGGCCGACG CGGCGCCGGC AGCCGCGAGC GTCACCGCGG TCCAAGATCC TGCGTCTGCG
TCTGCTCCGG AACCGGCCGC CGCGAACGTT GCTGAGCCCG CATCCGCACC CGCCGCGGCG
CCGACGCAGG TCTCCGGGGA GCGGACATCT GAAACGAGTG CGGTCGCGCC CCGCTCGAGC
CCGGAAGACG CGCCGGCCTC CGTCGACTCG CCTGCCGCAG CGGGCGCTCT GCGCAGGGAC
ACCGACGTCG CGAAGATACA CCCCGACGTC ACGCCTGCAT TCCCCGGAAG CGAGCAGGCC
GCGCCGGTCG ACGCGGCGCT GCTCAAGGCG CTTACCGAGT GGGCGGACGC CTGGTCTCGC
CGCGATTCCG AAGCGTATTT CGCCGCCTAC GACGCCCACT TTGTTCCCGA CGACGGCGCC
AGCCGCGAGG CGTGGCGGCG GCGCAAGCTG CAGGCGTTCG ACGCGACGAA GGCGCTCGAG
GTCAAGGTCG ACGCGCCGGC GGCCGAGCGC ACCGAAGAGG GCGCGGTCGC CCTGACCTTC
AAGCAATTTT TCCGCTCGGA TACTTACCGC GACGCCGTGC TCAAGCGGCT GCTCATGGTC
GAACGCGATG GTCGCTGGCT GATCGTCGAA GAGAAAGTGC TGCAGACCCT CGAGCGAGGC
CGCCCGTGA
|
|---|
| Protein sequence | MPRLLISVLL VALVAGCSIP KLGPHRIDVQ QGNALDQENV SRLKPGLNRS QVRFLLGTPL
VVDPFRGDRW DYVYVYYKAG KLAEQKRITL HFDGDTLARI EGDVPQEVAE AQAQQAPPAP
EADAAPAAAS VTAVQDPASA SAPEPAAANV AEPASAPAAA PTQVSGERTS ETSAVAPRSS
PEDAPASVDS PAAAGALRRD TDVAKIHPDV TPAFPGSEQA APVDAALLKA LTEWADAWSR
RDSEAYFAAY DAHFVPDDGA SREAWRRRKL QAFDATKALE VKVDAPAAER TEEGAVALTF
KQFFRSDTYR DAVLKRLLMV ERDGRWLIVE EKVLQTLERG RP
|
|---|
| |