Gene Tbd_1104 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTbd_1104 
Symbol 
ID3673175 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThiobacillus denitrificans ATCC 25259 
KingdomBacteria 
Replicon accessionNC_007404 
Strand
Start bp1162880 
End bp1163584 
Gene Length705 bp 
Protein Length234 aa 
Translation table11 
GC content66% 
IMG OID637709787 
Producthypothetical protein 
Protein accessionYP_314862 
Protein GI74317122 
COG category[C] Energy production and conversion 
COG ID[COG1018] Flavodoxin reductases (ferredoxin-NADPH reductases) family 1 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.0241757 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value0.525247 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGCACGTCT TTGAAGCCGA GATCGCGGCA GTCGTCGCCG CCACCCCCCA GATACGTGTT 
CTCCGCCTCG CCGTCGCCGA CCCCGGCTTC CGCTTCCTGC CCGGGCAGTG GGTCGATCTG
AGCGTCGATG TCGACGGCGC CAGGCACACG TCCGGTTACT CGATCACGAC CTCGCCGCTG
CATCCCGGCA CGATCGAACT CGCCGTCAAG GCGAGCGCGC GGCATCCGCT CGCGCGTTGG
GTTCACGACG AGGCCGCGCC GGGTGACCGC GTGCGCGTGA GCCAGGGCCA GGGGCCGTTC
GTCTACCTGC CCGAGATGAG CGACAACGTC GTGCTGATCG GCGGCGGCGT GGGCATCACG
CCGATGCTCT CGATCTTTCG CCACGTCCGC GACGCCGGAC TGGGGACGCA GGCGCACCTG
GTCTACAGCG TATCGGACAG TCGCGAAATC CTCTTCCGCG ACGAACTCGA AGCCGCGGTC
CGCAACCACC GCAACCTGCA TCTCAGCATC ACGGTCACCC AACCCGATCC GGCGTGGCAT
GGTCTGACCG GCCGCATCGA TCCGGTCAAG CTGCATGCGC TCGACGTGCC GGACGATACG
CTCTATTACC TGTGCGGGCC GCGCGGAATG GTCGAAGACA TGAGCACGCT GCTCCACGAC
CTCGGCGTGC CGATGAACCG GATCATCTTC GAAAAATGGT GGTAG
 
Protein sequence
MHVFEAEIAA VVAATPQIRV LRLAVADPGF RFLPGQWVDL SVDVDGARHT SGYSITTSPL 
HPGTIELAVK ASARHPLARW VHDEAAPGDR VRVSQGQGPF VYLPEMSDNV VLIGGGVGIT
PMLSIFRHVR DAGLGTQAHL VYSVSDSREI LFRDELEAAV RNHRNLHLSI TVTQPDPAWH
GLTGRIDPVK LHALDVPDDT LYYLCGPRGM VEDMSTLLHD LGVPMNRIIF EKWW