Gene Tbd_1038 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTbd_1038 
Symbol 
ID3671263 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThiobacillus denitrificans ATCC 25259 
KingdomBacteria 
Replicon accessionNC_007404 
Strand
Start bp1101442 
End bp1102191 
Gene Length750 bp 
Protein Length249 aa 
Translation table11 
GC content65% 
IMG OID637709721 
Producthypothetical protein 
Protein accessionYP_314796 
Protein GI74317056 
COG category[R] General function prediction only 
COG ID[COG0730] Predicted permeases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value0.311606 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value0.183068 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGCTCGACC AGCTGATCCT GTTCGTCGCC TCGCTCGCGG CCAATTTCTT CTCGGCCCTG 
TCGGGCGGCG GCGCCGGACT GATCCAGTTT CCGATGCTGA TTTTTCTCGG CTTGCCGTTC
GGTGTCGCGC TCGCCACCCA CAAGGTCGCA AGCGTCGCGC TCGGGCTCGG CGCAACCCTT
CGCCATCTCA AGGAATCGCA TCTCGAGCGG CGCTTCGCGG CGGTGATCCT TGCCGCCGGG
CTCCCTGGCG TCGTACTTGG CGCGGTCACG ATCCTCCAGA TTCCGGAGCG CGCGGCGACC
CTCGCACTGG GTCTGCTGAC GCTGGGACTC GGCGTCTATT CGGTATTCAA GCCCCGGCTC
GGGCTCGCGC ACGAACCGAG AAACCGCGAG GGCGTCGCGC TCGTCGGCGG CGCCGCGGGA
CTGTTTGTCG TCGGCTTTCT CAATGGGTCG ATCACCAGCG GAACGGGGCT TTTCCTCACC
ATCTGGCTGA TCCGCTATTT CGGTCTCGAT TACACGCGCG CCGTCGCGTA CACGCTGATC
CTCTGCGGTC TGATCTGGAA CGGCACGGGG GCGCTGGTTC TCGGGGTCAT CGGCACGGTG
GCGTGGGACT GGATGCCGGC CCTGCTCGCG GGCTCGCTGC TCGGCGGTTA TCTCGGCAGC
CATCTGGCGA TCCGCAAGGG CAATTTGTGG ATCAAGCGCG CGTTCGAAAC CGTGACGATA
CTGATCGGCT TGAAGCTGAT TCTCGGCTAG
 
Protein sequence
MLDQLILFVA SLAANFFSAL SGGGAGLIQF PMLIFLGLPF GVALATHKVA SVALGLGATL 
RHLKESHLER RFAAVILAAG LPGVVLGAVT ILQIPERAAT LALGLLTLGL GVYSVFKPRL
GLAHEPRNRE GVALVGGAAG LFVVGFLNGS ITSGTGLFLT IWLIRYFGLD YTRAVAYTLI
LCGLIWNGTG ALVLGVIGTV AWDWMPALLA GSLLGGYLGS HLAIRKGNLW IKRAFETVTI
LIGLKLILG