Gene Tbd_1029 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTbd_1029 
Symbol 
ID3671254 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThiobacillus denitrificans ATCC 25259 
KingdomBacteria 
Replicon accessionNC_007404 
Strand
Start bp1095190 
End bp1095735 
Gene Length546 bp 
Protein Length181 aa 
Translation table11 
GC content65% 
IMG OID637709712 
Productcytochrome b561 
Protein accessionYP_314787 
Protein GI74317047 
COG category[C] Energy production and conversion 
COG ID[COG3038] Cytochrome B561 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value0.145738 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0105144 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCACGG TGAGCCGGTA TTCGACCCCG GCGATCGTGC TGCACTGGCT GGTCGTGCTG 
GGGATCTTCG CGGCCTTCCC GCTCGGCGTG TACATGCACG AGCTGCCGCT CTCGCCGTAC
AAGCTCCAGC TCTATAGCTA TCACAAGTGG ATCGGGGTGA CGATTTTCCT GCTCGTCGCG
CTCCGGCTCG CCTGGCGCGC CGGCCATCCG CCGCCCGCGC TTCCGCCGCT GCCTGCCTGG
CAGCGCCGCG CGAGCGCCGC CGTGCACGGC CTGCTTTACC TCTTGATGGT CGCGATCCCG
CTCTCGGGCT GGCTCATGAG TTCGGCCAAG GGCTTCCCGA CCGTGTGGTT CGGTGTGCTT
CCGCTGCCCG ATCTGGTTGA CAAGAATCGC GAGCTCGGCG AGCTGCTGAC CACGGTGCAC
AAGGGGCTCA ACATCACGTT GCTGGCTTTG GTCGTCGTCC ACGTCGCGGC GGCCCTGCAG
CATCACTTCA TCGAACGTCA CCCGTTCCTG CAGCGCATGG GCTGGGGAAG AAAGGAGTTG
TCATGA
 
Protein sequence
MSTVSRYSTP AIVLHWLVVL GIFAAFPLGV YMHELPLSPY KLQLYSYHKW IGVTIFLLVA 
LRLAWRAGHP PPALPPLPAW QRRASAAVHG LLYLLMVAIP LSGWLMSSAK GFPTVWFGVL
PLPDLVDKNR ELGELLTTVH KGLNITLLAL VVVHVAAALQ HHFIERHPFL QRMGWGRKEL
S