Gene Tbd_1028 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTbd_1028 
Symbol 
ID3671253 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThiobacillus denitrificans ATCC 25259 
KingdomBacteria 
Replicon accessionNC_007404 
Strand
Start bp1094753 
End bp1095193 
Gene Length441 bp 
Protein Length146 aa 
Translation table11 
GC content70% 
IMG OID637709711 
ProductMarR family transcriptional regulator 
Protein accessionYP_314786 
Protein GI74317046 
COG category[K] Transcription 
COG ID[COG1846] Transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value0.663158 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.00390139 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGCCCAAGC AACCCGAATT CCTGCCGACC CTGCGCGCCC TCGTCGAGTG CTACCAGGCG 
TTCGAGGCGT CGTCGGCCGC CGACATCCGT GCCGCGGGTC TGACGCCGCC GCAGTTCGAC
ATCGTCGCGA CGCTCGGCAA CACGGCCGGC ATGACGGCGA CCGAGCTCGG CGAGAAAACC
CTGATCACCA AGGGCACGCT GACCGGCATC GTCGACCGTC TGGTCGCACG CGGCTGGGTC
GAGCGCGCCG CCCACGACAG CGACCGCCGC TGCCAGATCA TCCGCCTGAC CCAGGCCGGC
GAGCGCCTTT TCAGCACGGT CTTTCCTGCG CACATGGACT ACCTCGCGCA GCGCTTCGCC
GGCACCGGCG CGGCCGACCA TGCGCGCTGG CGCGAGGCCT TGCGCGGCCT CGAGCAGATC
TTCCGCAAGG AGGCGTCATG A
 
Protein sequence
MPKQPEFLPT LRALVECYQA FEASSAADIR AAGLTPPQFD IVATLGNTAG MTATELGEKT 
LITKGTLTGI VDRLVARGWV ERAAHDSDRR CQIIRLTQAG ERLFSTVFPA HMDYLAQRFA
GTGAADHARW REALRGLEQI FRKEAS