| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tbd_1005 |
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| Symbol | |
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| ID | 3671228 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thiobacillus denitrificans ATCC 25259 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007404 |
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| Strand | + |
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| Start bp | 1072649 |
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| End bp | 1073200 |
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| Gene Length | 552 bp |
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| Protein Length | 183 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 637709686 |
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| Product | 2',5' RNA ligase |
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| Protein accession | YP_314763 |
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| Protein GI | 74317023 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG1514] 2'-5' RNA ligase |
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| TIGRFAM ID | [TIGR02258] 2'-5' RNA ligase |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 0.0968272 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 8 |
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| Fosmid unclonability p-value | 0.0378462 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | GTGGCTGACT CCCGCACGCC GGACGTCCCT TCCCTCCGCC TGTTCTTCGC CCTGTGGCCG
GACGACGCCA CCCGCGACGC GCTCGACCGC ACCGGCAAGT GGCTGCATCG GCACTGGGGC
GGGCGGCGCA TGCGTGCCGA GACCCTGCAC ATCACGCTCG CCTTTCTCGG CACGACGCCC
GCCGACAGGC TCGACGCGCT TATTGGCTGC GCCGACGGCA TAGCCGCCGA GCCCTTCGCG
CTTGTGCTCG ACCGGCCCGG CTACTGGCGG CATAACCATG TCGGCTGGCT CGGCGCGAGT
GAGGCGCCGC CGCCTCATCT CGCGCTCGTG ACGGCGCTCA ATGCCGCTCT CCAGGCGGGC
GGTTTTCCGG TCGATGCACG TGCGCACGTG CCTCATGTCA CGCTGTTGCG CAACACCGCC
GGCGGCGACC TGCCCCTATG CAGGCCGGTA AGTTGGGCGG TCCCGGATTT CGTGCTCGTG
AGATCCCGTA CCGATCCCAC AGGTGCGCAG TACGAAGTGA TTCGACGCTG GCTGCTGGTC
CATCCTAAAT GA
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| Protein sequence | MADSRTPDVP SLRLFFALWP DDATRDALDR TGKWLHRHWG GRRMRAETLH ITLAFLGTTP
ADRLDALIGC ADGIAAEPFA LVLDRPGYWR HNHVGWLGAS EAPPPHLALV TALNAALQAG
GFPVDARAHV PHVTLLRNTA GGDLPLCRPV SWAVPDFVLV RSRTDPTGAQ YEVIRRWLLV
HPK
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