Gene Tbd_0992 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTbd_0992 
Symbol 
ID3671215 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThiobacillus denitrificans ATCC 25259 
KingdomBacteria 
Replicon accessionNC_007404 
Strand
Start bp1058017 
End bp1058529 
Gene Length513 bp 
Protein Length170 aa 
Translation table11 
GC content67% 
IMG OID637709673 
Producthypothetical protein 
Protein accessionYP_314750 
Protein GI74317010 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0791] Cell wall-associated hydrolases (invasion-associated proteins) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value0.480266 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value0.532227 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGACCGTTT CCGTTTCAAC TATAGAGCAG ATTGTTTCGA TGAACCGCGC CCTCCTGCCC 
CTGCTGGCCT TGCTGGCGCT TCCCGTCGCG GCGGCAGACG TGCCGGCGGA TGTCCCGATC
TACGCCCTGA GTCTGATCGG GCACCCTTAC CGGCTCGGCG GCACCTCGCC CGAGACAGGG
CTCGACTGCA GCGGCTTCGT CGCTCACGTC TACGGACAGG TGACCGGGGT CGTCCTGCCG
CGCGACAGCC GTTCGATCAG CACGCAGACG ATTCCGCTCG CGCCGGACGA ACTCCTGCCC
GGCGATCTTG TCTTCTTCAA CACCCTCGAG CGCGCGTTTT CCCATGTCGG CATTTATCTG
GGCGATGGCC GTTTCGTGCA CGCGGCGAGC AGCCGCAGCG GCGCGGTCAT GGTCTCCCGT
ATCGGCGACC CGTACTGGCG TGAACGCTAC GACGGCGCGC GCCGCGTCGT CGTGCCGGAC
GCCGGGCAAC CGGCCGCAGA TGATCCGCGC TAA
 
Protein sequence
MTVSVSTIEQ IVSMNRALLP LLALLALPVA AADVPADVPI YALSLIGHPY RLGGTSPETG 
LDCSGFVAHV YGQVTGVVLP RDSRSISTQT IPLAPDELLP GDLVFFNTLE RAFSHVGIYL
GDGRFVHAAS SRSGAVMVSR IGDPYWRERY DGARRVVVPD AGQPAADDPR