Gene Tbd_0886 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTbd_0886 
Symbol 
ID3671610 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThiobacillus denitrificans ATCC 25259 
KingdomBacteria 
Replicon accessionNC_007404 
Strand
Start bp935067 
End bp935930 
Gene Length864 bp 
Protein Length287 aa 
Translation table11 
GC content67% 
IMG OID637709565 
Productputative thioredoxin protein 
Protein accessionYP_314644 
Protein GI74316904 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG3118] Thioredoxin domain-containing protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones30 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACGCTCT CGCCCCACGT CTTCGACGCC ACCGCCGACA ATTTCAATCG CCTGGTTCTG 
GAGAATTCGC ACAAGGGACC CGTGCTGGTC CACTTCTGGA CCCCGAAGGC CGGGCCCTGC
TTCGTGCTGA TGCCGCGGCT CGTGCGGCTC GCGGCCGAGT ACGGCGGCAA GTTCCTGCTG
GTGATGCTGA ACGCCGAGGA GCTTCCGCAA CTCGCACAGC GCTTCGCCGT GAACTCGGTT
CCGACCGTGA AATTCTTCTG GCGCGGCGAA GTCGCGCACA CGATCCACGG CGCCGAGCCC
GACAGCACTT TTCGCGAAGC TCTCGACCGC TTCATCGCCG GCGACGCCAA CCGCGCGCAT
GCTCTCGGCG TCGCCGCGTG GCAGGCCGGC AAACTGTCGG AGGCGCGCAT GCTGCTCGCC
AACGCCGCCA TGGCCGAGCC GGACAATCTC GACATTCCGC GCGACCTCGC CAAGCTGCTA
TGGGCCGAAG GCGACGGCGA TCAGGCGCTG AAACTGCTCG AGAGCCTGCC GCCCGAGGCA
CGCAAGGACG CGCGCATCGC ACCGCTCCAC GCCCACCTGC GCCTGGCCGA GACCGCGCGC
CAGGCGCCTG CACTCGCCAC ACTCGACGAG CACATAGCAA GCCAGCCTGA CGACATCGAG
ACGCACTATC AGCGCGCCGC CGTGCTGCTG GCGGGCGACG ACTACGCGGG CGCGATGGAC
GAACTGCTGT TCATCGCACG CACCGATCGC GACTTCGGCC AGGATATCGG CCGCATCAGC
CTGCTCGCGT TGTTCGACCT GCTCGGCAGC GCCGATCCGC TGACGCTCAA ATACCGGCGC
CTGCTGTCCG AGTCGCTGCA TTGA
 
Protein sequence
MTLSPHVFDA TADNFNRLVL ENSHKGPVLV HFWTPKAGPC FVLMPRLVRL AAEYGGKFLL 
VMLNAEELPQ LAQRFAVNSV PTVKFFWRGE VAHTIHGAEP DSTFREALDR FIAGDANRAH
ALGVAAWQAG KLSEARMLLA NAAMAEPDNL DIPRDLAKLL WAEGDGDQAL KLLESLPPEA
RKDARIAPLH AHLRLAETAR QAPALATLDE HIASQPDDIE THYQRAAVLL AGDDYAGAMD
ELLFIARTDR DFGQDIGRIS LLALFDLLGS ADPLTLKYRR LLSESLH