| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tbd_0880 |
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| Symbol | |
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| ID | 3671645 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thiobacillus denitrificans ATCC 25259 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007404 |
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| Strand | - |
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| Start bp | 930350 |
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| End bp | 931240 |
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| Gene Length | 891 bp |
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| Protein Length | 296 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 637709559 |
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| Product | farnesyl-diphosphate synthase |
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| Protein accession | YP_314638 |
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| Protein GI | 74316898 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG0142] Geranylgeranyl pyrophosphate synthase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 27 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGATGAGTG ATTTTTCCGC CTGGACACAG GCATGCCAGG CGCGTATCGA ACACGTGCTG
GCCGAGCGGC TGCCGCCGTC CGACATTGCA CCGAAGCGGC TGCACGAGGC CATGCGCTAC
GCGGTGCTGG GCGGCGGAAA ACGCGTGCGT CCGCTGCTGG CGTTCGCCGC CGGCGACGTC
ACGGGCGCCG CCGTCGAACA GGTGCAGCAC GCGGCGGCCG CGGTCGAATT GATTCACGCC
TATTCGCTCG TTCACGACGA CATGCCGGCG ATGGACGACG ACGCGCTGCG CCGCGGCAAG
CCCACCGTCC ATGTCGAGTT CGACGAGCCG ACCGCGCTGC TCGTGGGCGA CGCGCTGCAG
AGCCTCGCCT TCGACATCCT GGCGAGCCCC GGACTGGCGC AGGCCGCTTC GACGCAACTC
GCGATGGTGC AGCTGCTGGC CCGGGCGTCC GGCTCGCGCG GCATGGCCGG CGGCCAGGCG
ATCGACCTCG CGAACGTCGG CAAGTCTCTC GACCTCACCG AACTCGAATT CATGCACATC
CACAAGACGG GCGCCCTGAT CCGCGCGTCG GTCCTGCTCG GCGCCGAGTG CGGCACGCTG
TCGGAGCCTG CGCGCACGGC GCTCGACCAT TACGCGAAAT GCATCGGCCT CGCCTTCCAG
GTCGTCGACG ATGTGCTCGA CGCCGAGGCG TCGACCGCGA CGCTCGGCAA AACCGCGGGC
AAGGACGCGG CGAACAACAA GCCGACCTAC GTCAGTCTGC TCGGCGTCCA ACGCGCCCGC
GAACGGGCCC TGGAATTGCG CGCCGACGCC TGCGCCGCGC TCGATCCGCT CGGTCCGTCC
GCGCGACGCC TGCGCGAGCT GGCGGATTTC GTCGTCGAGC GGACGTTCTG A
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| Protein sequence | MMSDFSAWTQ ACQARIEHVL AERLPPSDIA PKRLHEAMRY AVLGGGKRVR PLLAFAAGDV
TGAAVEQVQH AAAAVELIHA YSLVHDDMPA MDDDALRRGK PTVHVEFDEP TALLVGDALQ
SLAFDILASP GLAQAASTQL AMVQLLARAS GSRGMAGGQA IDLANVGKSL DLTELEFMHI
HKTGALIRAS VLLGAECGTL SEPARTALDH YAKCIGLAFQ VVDDVLDAEA STATLGKTAG
KDAANNKPTY VSLLGVQRAR ERALELRADA CAALDPLGPS ARRLRELADF VVERTF
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