| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tbd_0853 |
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| Symbol | |
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| ID | 3671617 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thiobacillus denitrificans ATCC 25259 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007404 |
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| Strand | - |
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| Start bp | 902371 |
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| End bp | 902913 |
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| Gene Length | 543 bp |
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| Protein Length | 180 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 637709531 |
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| Product | ribosomal large subunit pseudouridine synthase E |
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| Protein accession | YP_314611 |
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| Protein GI | 74316871 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG1187] 16S rRNA uridine-516 pseudouridylate synthase and related pseudouridylate synthases |
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| TIGRFAM ID | [TIGR00093] pseudouridine synthase |
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Plasmid Coverage information |
| Num covering plasmid clones | 27 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 0.711154 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGGCGCGAT TGATTTTGTT CAACAAACCC TATGGCGTGC TGAGCCAGTT CACGCCCGAG
GGGCGCTGGC AGGGTTTGCG CGATCATCTC GCGCTGCCGG GCGTCTACGC GGCAGGACGT
CTGGACGCCG ACAGCGAAGG CCTGCTGATT TTAACCGATG ACGGCCCGAC CCAAGCCCGC
ATCGCCGACC CCCGGCACAA GTTGCCGAAG ACCTACTGGG CGCAGGTGGA AGGCGCGCCG
GCCGACGCCG ACCTCGAGCC GTTGCGCCGC GGTGTCGACC TCGGCGACTT CGTCACCCGT
CCGGCAGGGG CGCGCATCAT CGCCGAACCG CCCAGCCTCT GGCCGCGTAA CCCGCCGATC
CGCTTTCGCG CGAACATTCC GACGGCCTGG ATCGAACTTG TGATCGCCGA GGGCAAGAAC
CGCCAGGTGC GGCGCATGAC GGCGAAGGTC GGCTTTCCGA CGCTGCGCCT GATCCGCGCG
GCGGTCGGCG AATGGAATCT GAACGGGCTA CAGCCCGGCC AATGGAAGGA ACTGCATGTC
TGA
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| Protein sequence | MARLILFNKP YGVLSQFTPE GRWQGLRDHL ALPGVYAAGR LDADSEGLLI LTDDGPTQAR
IADPRHKLPK TYWAQVEGAP ADADLEPLRR GVDLGDFVTR PAGARIIAEP PSLWPRNPPI
RFRANIPTAW IELVIAEGKN RQVRRMTAKV GFPTLRLIRA AVGEWNLNGL QPGQWKELHV
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