| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tbd_0839 |
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| Symbol | |
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| ID | 3673536 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thiobacillus denitrificans ATCC 25259 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007404 |
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| Strand | + |
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| Start bp | 889307 |
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| End bp | 889966 |
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| Gene Length | 660 bp |
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| Protein Length | 219 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 637709517 |
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| Product | HAD family hydrolase |
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| Protein accession | YP_314597 |
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| Protein GI | 74316857 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG1011] Predicted hydrolase (HAD superfamily) |
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| TIGRFAM ID | [TIGR01509] haloacid dehalogenase superfamily, subfamily IA, variant 3 with third motif having DD or ED |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 0.18437 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 0.595006 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATCGACT GGTCCCGCAT CGGCACCGTG TTTCTCGACA TGGACGGCAC GCTGCTCGAT
CTTTATTTCG ACAATCACTT CTGGCGCGAG CACATGCCGC GCCGCTATGC CGAATACCAC
GGGCTCGACG AGGCCGTCGC GCGCGCGCAT CTCGATGCCC ATTACGAACG CCACGCCGGC
ACCCTCAACT GGTATTGCCT GGATTTCTGG ACCAGCGAGC TTGCGCTCGA CATCGTGCAG
CTGAAACAGG AGGTCGCCCA CCTGATCGCC GTACGCCCCG ACGTCCCCGC GTTTCTGCGC
GCGCTGCGCG ACTCGGGCCG GCGCGTGGTG ATGGTGACCA ACGCCCACCC CAAGAGCCTC
GACCTCAAGA TGCGCGAGAC CCGGCTCGAC CCCTATTTCG ACGCGCTGAT TTCTTCGCAT
CAGGTCGGCT TGCCGAAGGA ACATCCCGAT TTCTGGCAGG GCCTGCAGGC GATCGAGCCG
TTCGACAGGC TGCGCACGCT CTTCGTCGAC GACAGTCTGC CGGTGCTCGA GAGTGCGCGA
GCCTACGGCA TCGCGCAGTT GCTGGCGATC GCCAACCCGG ACTCGCGACA GGCGCACAAG
GACTGCGGGC CGTTCGACGC GATCACGAGT TTCGAAGCCG TGATGCCGCC AGCCGGCTGA
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| Protein sequence | MIDWSRIGTV FLDMDGTLLD LYFDNHFWRE HMPRRYAEYH GLDEAVARAH LDAHYERHAG
TLNWYCLDFW TSELALDIVQ LKQEVAHLIA VRPDVPAFLR ALRDSGRRVV MVTNAHPKSL
DLKMRETRLD PYFDALISSH QVGLPKEHPD FWQGLQAIEP FDRLRTLFVD DSLPVLESAR
AYGIAQLLAI ANPDSRQAHK DCGPFDAITS FEAVMPPAG
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