| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tbd_0837 |
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| Symbol | |
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| ID | 3673534 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thiobacillus denitrificans ATCC 25259 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007404 |
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| Strand | + |
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| Start bp | 887390 |
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| End bp | 888319 |
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| Gene Length | 930 bp |
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| Protein Length | 309 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 637709515 |
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| Product | peptidoglycan-binding protein LysM |
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| Protein accession | YP_314595 |
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| Protein GI | 74316855 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0739] Membrane proteins related to metalloendopeptidases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 0.239144 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 11 |
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| Fosmid unclonability p-value | 0.258287 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGAAGGGCC TGGCCGTCGC CTTGGCGCTG CTGCTCGGGC TGGCCGGTTG TGCGGCGCCC
GGCTACGCGC CGGTCAGCGA CCGGACCTCC GGCCGCGGGG CGGCGCGGGT CGAGGCCCCG
CGGCCGACGC CCCAGATCGC GCCGTCCAGG AACGGCTTGC ACACCGTGCA AAGCGGCCAC
ACCTTGTACG CGATCGCCTT CGCGAACGGG CTCGATTACC GCGAGATCGC GATCTGGAAC
AAGCTCGAGT CGGCCGACCG CATCCTGGTC GGGCAGGTGC TGCGGCTGAC GCCGCCCCCG
GGCGAGGTCG AAATCGCGCC GCTCGACGAC GAGCCCGCCC CGGCCGCGCA ACCGCTCACC
GAGGCGCGCG TGCTGCGCGA ACCGCAGGCC GTGCTGATGC CGTACTCCGA AGCCAACTGG
GCGCAGGTAT CGAAACCCGC GGTCGCGGCC GCGCCCGAAC CTCCGCCGTC CGCCCCCCCG
GCGACCGCTC CCGCGGCGAC CGCTCCCGCG GCGACCGCCC CCGCCGGGCC GGCGTCGCAG
AACCCGGTGC CCACCGCACC GGTCGAAGCC TGGCTCTGGC CGGTCGAGGG CAGGCTCGCC
GGACGCTTCG GCGCAGCAGG AGGCAAAGGA ATAGACATTG TCGGACAACG GAATGCGCCC
GTAATAGCGG TCGCGCCGGG TAAAGTGGTT TACAGTGGCA GCGGCCTCCG TGGATACGGA
CGGCTGCTGA TCGTCAAACA TGCGGGCGAA TACCTTTCGG CGTACGCTCA CAACGAGACG
ATCCTGGTGA AGGAAGGCGA CGCGGTCGCG GCAGGTCAGA AGATCGCCCT CATGGGCGAC
AGCGACGCCG ACCGCGTGAA ACTGCATTTC GAGATCCGCC GTTATGGCAA ACCGCTTGAC
CCACTGAATT ATCTGCCGGA GCGTTCATGA
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| Protein sequence | MKGLAVALAL LLGLAGCAAP GYAPVSDRTS GRGAARVEAP RPTPQIAPSR NGLHTVQSGH
TLYAIAFANG LDYREIAIWN KLESADRILV GQVLRLTPPP GEVEIAPLDD EPAPAAQPLT
EARVLREPQA VLMPYSEANW AQVSKPAVAA APEPPPSAPP ATAPAATAPA ATAPAGPASQ
NPVPTAPVEA WLWPVEGRLA GRFGAAGGKG IDIVGQRNAP VIAVAPGKVV YSGSGLRGYG
RLLIVKHAGE YLSAYAHNET ILVKEGDAVA AGQKIALMGD SDADRVKLHF EIRRYGKPLD
PLNYLPERS
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