Gene Tbd_0802 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTbd_0802 
Symbol 
ID3673499 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThiobacillus denitrificans ATCC 25259 
KingdomBacteria 
Replicon accessionNC_007404 
Strand
Start bp843511 
End bp844512 
Gene Length1002 bp 
Protein Length333 aa 
Translation table11 
GC content64% 
IMG OID637709480 
ProductCa2+/H+ antiporter 
Protein accessionYP_314560 
Protein GI74316820 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG0530] Ca2+/Na+ antiporter 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value0.462867 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTTTTTC TCGAACTCCT CGGCTATCTG CTGCTCATCC TCGTTGCGGC GGAAATCTTT 
GTCAACGCGC TCGAGCACCT AGGGGAAAAA CTGCGCATCT CCGAAGGGGT GACCGGTTCG
CTGTTCGCCG CGGTCGGCAC GGCGATGCCT GAAACGCTCG TGCCGCTGCT CGCGATTTTC
GCCGGCACGG GCAACGCGAC GACCAACGAG GAGATCGGCG TCGGCGCGAT TCTCGGCGCC
CCGCTGATGC TCTCGACGCT GTCGCTGTTC CTCATGAGCG TCGCTGTGCT CGGACGGCGC
GGCCTGCGCG GCCACCTCAC ACCCGAAAAG ACCGGCCTCA AGCGCGATCT CGATTTCTTC
CTGATGGCCT TCGTGCTGGC CTTCGTCGCG ATGTTCGTGC CACACACGCA AAGCTGGGCG
CGCGGCGCGC TCGCCTTCGT CATGGTGATG ATCTACTTTT TCTACGTCAT GCTCACCTTG
CGTGCGTCGA GCAAGCTCGT CGACGAGGGC CACGCGACCG AGGCCGGCTC GCCCATGCTG
CTGACCCGGC TGGGCATGCC GCAGAACCTG CTCTTCATCA TCGTGCAGCT CGCGCTCGGC
CTGGGCTTGC TCGTTGCCGG CGCCAAGGGT TTCATCCACG GCGTCGAGGC CGCCGCGCCG
ATCATTGGCA TCTCCGCCTT GCTGCTCTCG CTGATGATCA TCCCGATCGC CACCGAACTG
CCCGAAAAGG TCAATTCGAT CCTGTGGATA CGCAAGCACA AGGACACATT GGCCTTCGGC
AACATCACCG GCGCGATGGT GTTCCAGGGC ACGCTGCTGC CTGCGATCGG CATCTCGCTG
ACGCCCTGGG CGCCGCAGAA GGAAGTGCTG CTCGGTGTGC TGGTCACGCT CGTCGCCGCG
TTCTGGCTGC GCTGGGCGGC AGTCACCGGA GGCCTGCGGG TCTGGCACCT GTTCGTGAAC
GGCGCGCTGT ACATCACCTA TCTCACCGTG GTGCTGGCTT AA
 
Protein sequence
MLFLELLGYL LLILVAAEIF VNALEHLGEK LRISEGVTGS LFAAVGTAMP ETLVPLLAIF 
AGTGNATTNE EIGVGAILGA PLMLSTLSLF LMSVAVLGRR GLRGHLTPEK TGLKRDLDFF
LMAFVLAFVA MFVPHTQSWA RGALAFVMVM IYFFYVMLTL RASSKLVDEG HATEAGSPML
LTRLGMPQNL LFIIVQLALG LGLLVAGAKG FIHGVEAAAP IIGISALLLS LMIIPIATEL
PEKVNSILWI RKHKDTLAFG NITGAMVFQG TLLPAIGISL TPWAPQKEVL LGVLVTLVAA
FWLRWAAVTG GLRVWHLFVN GALYITYLTV VLA