| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tbd_0779 |
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| Symbol | |
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| ID | 3673973 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thiobacillus denitrificans ATCC 25259 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007404 |
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| Strand | + |
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| Start bp | 822955 |
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| End bp | 823677 |
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| Gene Length | 723 bp |
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| Protein Length | 240 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 637709457 |
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| Product | ribosomal small subunit pseudouridine synthase A |
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| Protein accession | YP_314537 |
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| Protein GI | 74316797 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG1187] 16S rRNA uridine-516 pseudouridylate synthase and related pseudouridylate synthases |
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| TIGRFAM ID | [TIGR00093] pseudouridine synthase |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 0.549423 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 0.590405 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAGCTCT ATCGTGCGCT GCAGTCGCAG GGGCTCGGCA GCCGCCGCGG CTGCGCGGCG
CTTGTGCGCG CCGGCGCGGT TCTCGCCAAC GGACTCGCGT GCGCCGACCC TGAGGCCGAG
GTCGACCCGG TCGGTCTCGA ACTGACCGTG GACGGCACGG TGTGGGCGTA CCGCGACAAG
GCCTACCTCG TGATGCACAA GCCGGAAGGC TACGAATGTT CGCATCATCC GCGCCACCAC
CCGAGCGTCT TCAGCCTGTT GCCTGCGCCG CTCGTGCAAC GCGGCGTGCA GTGCGTCGGG
CGGCTCGATC AGGACACCAC CGGCTTGTTG CTGTTTTCCG ACGACGGCCA GTTCATCCAC
CGCATGACCT CGCCGAAAAA GCGCGTCGGC AAGGTGTATC GCGCGCGCTG TGCGGAGCCG
GTGAACGCAG CGACGCTCGC CGCGCTGCGT GCCGGCGTGC AACTCAACGA CGAGCCGGCG
CCGCTTGCGG CGCTGGCCTG CGAGGCGGTC GACGACCGTA CGCTGCGTCT CGTGCTCGCC
GAAGGCAAAT ACCATCAGGT CAGGCGCATG ATCGCCGCGG CGGGCAATCA CGTCGCGCGG
CTGCATCGCG AAGCGGTCGG CGAGTATCCG CTGCCGGACG ATCTGCCGCC GGGCGGCTGG
CGCTGGCTCG AAGCCGGCGA TCTGCAACGA CTGGAGTGTG CATGGCCGTC CGCGAAGTCC
TGA
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| Protein sequence | MKLYRALQSQ GLGSRRGCAA LVRAGAVLAN GLACADPEAE VDPVGLELTV DGTVWAYRDK
AYLVMHKPEG YECSHHPRHH PSVFSLLPAP LVQRGVQCVG RLDQDTTGLL LFSDDGQFIH
RMTSPKKRVG KVYRARCAEP VNAATLAALR AGVQLNDEPA PLAALACEAV DDRTLRLVLA
EGKYHQVRRM IAAAGNHVAR LHREAVGEYP LPDDLPPGGW RWLEAGDLQR LECAWPSAKS
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