| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tbd_0766 |
|---|
| Symbol | |
|---|
| ID | 3673960 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Thiobacillus denitrificans ATCC 25259 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007404 |
|---|
| Strand | + |
|---|
| Start bp | 810031 |
|---|
| End bp | 811140 |
|---|
| Gene Length | 1110 bp |
|---|
| Protein Length | 369 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 74% |
|---|
| IMG OID | 637709444 |
|---|
| Product | TPR repeat-containing protein |
|---|
| Protein accession | YP_314524 |
|---|
| Protein GI | 74316784 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG4783] Putative Zn-dependent protease, contains TPR repeats |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 12 |
|---|
| Plasmid unclonability p-value | 0.0146573 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 9 |
|---|
| Fosmid unclonability p-value | 0.0797434 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGCATCA TCAACCAGAC GCTGCGCGAG CTCGACGCGC GCCGGGCCGC GGCAGGCGGC
GTGCCCCTGC CGTCCCCGGT CGCCGTTCGC CGGCGCGACT GGCGGCCGGT GATCGCGGGG
ACCGTGCTCG TGTCCGCTGC CGCGCTGTTC GGCTGGTTCA AGTTCGGCGT GCCGGGGGAG
GCCATGCCGC CGCTCACGCC CGCCGCTGCC CATCCGGCCG CGCCGCAAAC CGAACTGCAA
GCAGCGCACC AACCCGCTAC ACAACCGGCA CCCGAACCGG CACCCGAACC GGCACCCGAA
CCGGCACCCG AACCGGCACC CGAACCGGCA CCCGAACCGG CACCGCGGGT CGCGATGCCG
CGAACGCCCG CCCCGATACC GGCCCTTACC GCGCGGGCGG ATTCGTCGCC GCGGGTCGAA
GCCGTCCCTA TCGCCGATCA GGGCGCGCCG CAGGCATCCG ACATGGCCGT CGCGGCGCCG
TCTGCGCCGG CGAGTACAGC CGCGCGGGAG ACGCGCATTC GCAAGGACTT CAGCCCACCG
AGTGCCGATG CGCAGGCCGA AGCCAGCTAT CGCAGGGCGG CAGCGTTGGC GCAGGGTGGC
CGCGAAAGCG AAGCGCGCAC GCTGCTCGGC GACACACTCC GGATCGCTCC CGGGCACGCC
GCGGCGCGCC AGTTGCTGGC GACGTTGCTC CACGAAGCCG GTCAGTACGG CGCAGCCGAA
GCGACCTTGG CCGCGGGCCT TCGCGCGTCG CCCGACCACC CGTGGTTCGC GCTGAGCCTC
GCGCGCGTGC AGGCGGAACG CGGAGACATC GCTGCGGCGG TCGCCACGCT CGGCGACGGC
ATCGAACGCC GCACGGTCGA CGCCGAGTAT CGGGCGACGC TCGCGGCGCT GCTGCTGAGC
ATCGGTCGGC CCGGCGAGGC CGCGCGGCAG TACGAGCAGG CGGTCAAGAC GGCGCCGGGG
AACGGGCGAT GGTGGATGGG TCTGGGCCTC GCGCGCGAAG GTGAGGGAAA TGCCGCGGCG
GCGCGTGTCG CCTATGGCCG CGCGCTGGTC GCCGGTGACC TGCCGGAAAA GCTCGTGGTT
TTTGTGCAGG CGAAGCTCGC GGCGCCCTGA
|
|---|
| Protein sequence | MSIINQTLRE LDARRAAAGG VPLPSPVAVR RRDWRPVIAG TVLVSAAALF GWFKFGVPGE
AMPPLTPAAA HPAAPQTELQ AAHQPATQPA PEPAPEPAPE PAPEPAPEPA PEPAPRVAMP
RTPAPIPALT ARADSSPRVE AVPIADQGAP QASDMAVAAP SAPASTAARE TRIRKDFSPP
SADAQAEASY RRAAALAQGG RESEARTLLG DTLRIAPGHA AARQLLATLL HEAGQYGAAE
ATLAAGLRAS PDHPWFALSL ARVQAERGDI AAAVATLGDG IERRTVDAEY RATLAALLLS
IGRPGEAARQ YEQAVKTAPG NGRWWMGLGL AREGEGNAAA ARVAYGRALV AGDLPEKLVV
FVQAKLAAP
|
|---|
| |