| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tbd_0723 |
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| Symbol | |
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| ID | 3673814 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thiobacillus denitrificans ATCC 25259 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007404 |
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| Strand | - |
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| Start bp | 765834 |
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| End bp | 767807 |
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| Gene Length | 1974 bp |
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| Protein Length | 657 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 637709401 |
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| Product | cytochrome c, class I |
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| Protein accession | YP_314481 |
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| Protein GI | 74316741 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG0672] High-affinity Fe2+/Pb2+ permease |
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| TIGRFAM ID | [TIGR00145] FTR1 family protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 0.694021 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 0.821024 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAATCAAC GCACCTTCCA GGCGGCCTTC CACGCGGTGG GCTGGGTCGC CGCGCTCCTC
GTGCTCGTCG CGCTGAGCCT GCCGGCCCGC GCCGCCTCGG CCGACCCTGG GCGCACGGCC
CAGACCATTG CGCACATGCT CGACTACGTC GGCGTCGACT ACCCGGAATT CGTGCGCGAC
GGCAAGGTGC TCGACGCGGC CGAATATCAG GAGCAGTCGG AGTTTTCCGT CCAGGTCATC
GAACAGTTGC GCAAGCTGCC GGACAATCCC GCCAAGGCGG GGTTGCTGCG ACAGGCCGAA
ACGCTCAACG CGCGCATCGC CGCCCGTGCG CCCGGCGACG AGGTGTCCCG TCTCGCCGGC
GAATTGAGGC AGGGCGTCAT CGCCGCGTAT CGCATCGCCG TCGCGCCCAA GCGCGCACCC
GACCTGCGCG GCGCCGCCCG GCTGTATGCC GCGCAGTGCG CCGCCTGTCA CGGTGCGGAA
GGCAAGGGCG ACGGCGTCCA GGCGGGCGGC ATGGAGCCGG CGCCGGCCGA CTTCCACGAC
GCGGCGCGCA TGCGGCAACG CAGCGTGTAC GGCCTTTTCA GCACGATCAG TCTCGGCGTA
AGCGGCACCG CGATGGGTGG ATTCGACCAG CTGTCCGAGG CGGAGCGCTG GGCACTCGCG
TTCTACGTCT CCTCGCTCGG GACGCCGGCC GAGGTTGCCC AGCAAGGCGC GGCGCGATTC
GCCGCCGGCG GCAGCGACCT GCCCTTCGCC AACCTGAAAA CGCTCGTGAT GACGACCGAG
AACGAAGTCC GCGCGCGCGA CGGCGACGCC GCCGCCGCGG TCTTCGCCTG GCTCCGGCAA
AACCCGGTCG AAGCGAAGGC GACGGCCGAG CCGCCGCTCG CCTTCGCCGG CCGCCATGTC
GACGAGAGCC TCGCCGCCTA CCGCTCGGGC GACGTCGCGC TGGCCCAGCG GCTCGCCGTG
ACGGGCTATC TCGAAGGCTT CGAGCTCGTC GAGGCCAGTC TCGACGCCTC CGACCGCGCA
CTGCGGCAGG AAATCGAAAC CCAGATGACG GCCTACCGCA ATCTGCTGCG CGCCGGCGCA
CCCGTCGCCG ATGCGGAAAA ACAGGCCGCG CTGCTGCACG CGCTGCTCGC CCGTGCGGGC
GACACACTCG ACGCCGGCGG GCTGTCGCCG TTCGCCGCCC TGCTCGGTGC CTTCTTCATC
CTCGTGCGTG AAGGCCTCGA AGCACTGCTC GTGGTCGCGG CGGTCGTCGC CTTCCTGGTC
AAGGCCGAAC GCCGCGAGGC GCTGCGCTAC GTCCATGTCG GCTGGATCGG CGCGCTGGGC
CTGGGCGTGC TGACCTGGTT CGTCGCGAGC TACGTCATCG CGATCAGCGG CGCCGGGCGC
GAGGTCACGG AAGGGATCAC CGCGCTCGCC GCGAGCGCGA TCCTGCTCTA CGTCGGCTTC
TGGCTGCACG ACAAGTCCCA CGCCGACCGC TGGAAGGCCT TCGTCGGCCG CCACCTGACG
CACGCCTTGT CGCGCGGCAC GCTGTGGGCG CTCGCCGGCG TCTCCTTCCT GGCGGTCTAC
CGCGAAGCCT TCGAGACGGT GCTGTTCTAT CAGGCGCTCT GGCAGCAGGC CGAAGGCGCG
CGGAGTTCGG TGCTGGCGGG CGCCGGCCTC GGCGCCGCAA CGCTCGCCGT GCTCGGCTGG
ATGATCTTCC GCTTCGGCCT GCGCCTGCCG ATCGGCCCCT TCTTCGCCGC GAGCTCGGCG
CTGCTCGCGC TGCTCGCGGT CATGTTCGCC GGCCACGGCG TCGCCGCGCT GCAGGAAGCG
GGCTGGCTGC CGCTCGATCC TGTCAATTTC ATAGAGGTCC CGCTTCTCGG CATTTACGCC
AACGTACAGG CCTTGTCGCT GCAGGGCGGC CTGATTGCAG TGATCCTCGT CGGCTTTGCC
TGGGGCCACG CCCGGCGCGG GCTTGCGCTC GCCAGCGGCG ACGCACTCCG CTGA
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| Protein sequence | MNQRTFQAAF HAVGWVAALL VLVALSLPAR AASADPGRTA QTIAHMLDYV GVDYPEFVRD
GKVLDAAEYQ EQSEFSVQVI EQLRKLPDNP AKAGLLRQAE TLNARIAARA PGDEVSRLAG
ELRQGVIAAY RIAVAPKRAP DLRGAARLYA AQCAACHGAE GKGDGVQAGG MEPAPADFHD
AARMRQRSVY GLFSTISLGV SGTAMGGFDQ LSEAERWALA FYVSSLGTPA EVAQQGAARF
AAGGSDLPFA NLKTLVMTTE NEVRARDGDA AAAVFAWLRQ NPVEAKATAE PPLAFAGRHV
DESLAAYRSG DVALAQRLAV TGYLEGFELV EASLDASDRA LRQEIETQMT AYRNLLRAGA
PVADAEKQAA LLHALLARAG DTLDAGGLSP FAALLGAFFI LVREGLEALL VVAAVVAFLV
KAERREALRY VHVGWIGALG LGVLTWFVAS YVIAISGAGR EVTEGITALA ASAILLYVGF
WLHDKSHADR WKAFVGRHLT HALSRGTLWA LAGVSFLAVY REAFETVLFY QALWQQAEGA
RSSVLAGAGL GAATLAVLGW MIFRFGLRLP IGPFFAASSA LLALLAVMFA GHGVAALQEA
GWLPLDPVNF IEVPLLGIYA NVQALSLQGG LIAVILVGFA WGHARRGLAL ASGDALR
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