Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Tbd_0713 |
Symbol | |
ID | 3673804 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Thiobacillus denitrificans ATCC 25259 |
Kingdom | Bacteria |
Replicon accession | NC_007404 |
Strand | - |
Start bp | 751178 |
End bp | 752020 |
Gene Length | 843 bp |
Protein Length | 280 aa |
Translation table | 11 |
GC content | 73% |
IMG OID | 637709391 |
Product | periplasmic protein TonB |
Protein accession | YP_314471 |
Protein GI | 74316731 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0810] Periplasmic protein TonB, links inner and outer membranes |
TIGRFAM ID | [TIGR01352] TonB family C-terminal domain |
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Plasmid Coverage information |
Num covering plasmid clones | 32 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 7 |
Fosmid unclonability p-value | 0.015626 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | TTGAGATCGT CCGCGGAATC CTTTGCTGCG CGACCTCTGA TACGCCAGCC ACGGACCGCG CCGAAGCGCC CCCAGCCAGC ACCGTTTGTT TTTGAACTGG ACCGTCTGGG AATGACCGCT TCGCCCTCCG CCGCGCCCGC CCCGCTGCCC GCTCCCGGCT TTGCCGTCAC GGCAACGCGC CAGCGTGCGC TGCGGCCCGC GTTCCTGGGC GTGACGCTCG TGCACGCGGC CCTGCTGGGC ATGCTCATGT CTGCCGCCGA CGAGGCCGAG CCGCCCGTTC CCCCGCGCCC GCTGACGGTG AGTCTGATCG TGCCTGAGCC TGAACGGCCC GAGCCGCAAC CCGCCCCACG GCCAACGACA CCCGAACGCC CCGCCGAGCC GCAGCCGCCC GAACCGAAAC AGGAGACGCC GGCACCACCG CGGCTGGCCG CGGAGCCGAC GCCGGCGCTG CCTGCCGAGC CCGTCGTCGA AGCGCCCGCG CCCCGCTCCG AGCCTCCGCC GCCCGTCGCG CCGCCAAGCC AGCCGGCGCC GGTCGCCCAA GCGACACCGA CCCCCGCGCC GACCCCAGCG CGCCCGGCCG ACTACCGGAC CAATCCCAAG CCGCCGTACC CGCGTCTGTC GCGCCGGCTC GGCGAGGAAG GCACGGTTCG TCTCAACATT CTGGTCAACC CCGACGGCAG CGTCGCCCGC CTCGAACTCG CGGAGAGCAG CGGCCACCCG CGCCTCGATC GCTCGGCGAT GGAGACGGTG CAGTCGAGCT GGAAATTCGA GCCGGCCCGC CAGGGCGGCA GCCCGGTGGC CGCGTGGGTC ATCGTGCCGA TTCAATTCAC GCTCAGGAGC TAA
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Protein sequence | MRSSAESFAA RPLIRQPRTA PKRPQPAPFV FELDRLGMTA SPSAAPAPLP APGFAVTATR QRALRPAFLG VTLVHAALLG MLMSAADEAE PPVPPRPLTV SLIVPEPERP EPQPAPRPTT PERPAEPQPP EPKQETPAPP RLAAEPTPAL PAEPVVEAPA PRSEPPPPVA PPSQPAPVAQ ATPTPAPTPA RPADYRTNPK PPYPRLSRRL GEEGTVRLNI LVNPDGSVAR LELAESSGHP RLDRSAMETV QSSWKFEPAR QGGSPVAAWV IVPIQFTLRS
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