| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tbd_0708 |
|---|
| Symbol | |
|---|
| ID | 3672679 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Thiobacillus denitrificans ATCC 25259 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007404 |
|---|
| Strand | - |
|---|
| Start bp | 747566 |
|---|
| End bp | 748429 |
|---|
| Gene Length | 864 bp |
|---|
| Protein Length | 287 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 73% |
|---|
| IMG OID | 637709386 |
|---|
| Product | thiamine biosynthesis lipoprotein apbE precursor transmembrane |
|---|
| Protein accession | YP_314466 |
|---|
| Protein GI | 74316726 |
|---|
| COG category | [H] Coenzyme transport and metabolism |
|---|
| COG ID | [COG1477] Membrane-associated lipoprotein involved in thiamine biosynthesis |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 19 |
|---|
| Plasmid unclonability p-value | 0.314159 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 10 |
|---|
| Fosmid unclonability p-value | 0.115861 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGATTTCGC GACGCGCCCA GCCCTGGCTC GGCACCTTGG TCGAAATCGT CGCCGAGGGG
GCGGACGACG CGACGCTGAT CGCCGCGTCC GATCGCGCCT TCGCGCGCAT CGCCGCGGTT
CATGCGCAGA TGAGTTTCCA GGCCGCCGAC TCCGCGCTGT CGCGCGTCAA CCGCGACGCG
CAGCACGACT GGGTCACGCT GTCGCCTGAT CTTGCCGCCG TGTTCGCCGC AGCGCTGGCG
TTCGCGCGCG CGAGCGACGG TTTGTTCGAC CCGAGCGTCG CAGGGCGGCT CGTCGAATCG
GGCCAGTTGC CGCGGCACAC CGGCTTCCCG GACGCGACGA CGACCGACTG GCGCGGTATC
GAACTCGACG GCGACCGCGT GCGCTACACG CAGCCGCTGC TCGTCGACCT CTCGGGCATC
GCCAAGGGCT ATGCGGTCGA CGTGGCGCTC ACGAGCCTGC GCGACGCGGG CCTCGCGGCC
GCCACCGTAA ACGCCGGCGG CGATCTCGCG CGCTTCGGCG GCGCGACGCC GATTCACGTC
CGCCTGCCGC AGCAGCCGAC GCAGAGCGTG CGGCTCGCCG AACTCGACCA CGGTGCAGCC
GCGACCTCGG CCGGCTATTT CCAGCCCGGC GCGCTGCGCC ATCCGCGCAG CGGCGAAGCA
CTGTGCGCCG AGACCAGCGT CACCGTGCTC GCGCCTGACT GCATGACGGC TGACGCGCTG
ACCAAGGTCG TCGCGGCCGA CTCGGCCTGC GCCGCCGGCG TGCTCGCGCG CCATGGCGCG
CAGGCCATCG TGCTCGACGG CCAACGCGCG ATATGCAGCG ATGCCGACGG CTGGCACGAC
CTGCCCGCGG GAGGCACGGC GTGA
|
|---|
| Protein sequence | MISRRAQPWL GTLVEIVAEG ADDATLIAAS DRAFARIAAV HAQMSFQAAD SALSRVNRDA
QHDWVTLSPD LAAVFAAALA FARASDGLFD PSVAGRLVES GQLPRHTGFP DATTTDWRGI
ELDGDRVRYT QPLLVDLSGI AKGYAVDVAL TSLRDAGLAA ATVNAGGDLA RFGGATPIHV
RLPQQPTQSV RLAELDHGAA ATSAGYFQPG ALRHPRSGEA LCAETSVTVL APDCMTADAL
TKVVAADSAC AAGVLARHGA QAIVLDGQRA ICSDADGWHD LPAGGTA
|
|---|
| |