Gene Tbd_0680 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTbd_0680 
Symbol 
ID3672645 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThiobacillus denitrificans ATCC 25259 
KingdomBacteria 
Replicon accessionNC_007404 
Strand+ 
Start bp721178 
End bp721786 
Gene Length609 bp 
Protein Length202 aa 
Translation table11 
GC content65% 
IMG OID637709352 
Producthypothetical protein 
Protein accessionYP_314438 
Protein GI74316698 
COG category[S] Function unknown 
COG ID[COG4681] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value0.149078 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value0.810132 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGGTATTC CCGAAATTTA CGGCCGTCGT GCGGTGTCCT ACGCCGCGGT GTGCAGGAAT 
TCGACCATGG CGCTCAAGGC CACCATCTAC AAAGCCGACC TTCAGGTCGC CGACATGGAC 
CGCCACGTCT ACGGCGACCA TGCGCTCACC CTTGCAAGAC ACCCCTCCGA GTCCGAGGAA 
CGCATGATGG TGCGTGTCCT GGCCTATGCG CTCCACGCGC AGGACGGTAT CGCGTTCACG 
AAGGGGCTGT TCGACGTCGA CGAACCCGAG GTCTGGGTCA AGAACCTCGC CGGCGAGATC 
ACGCTTTGGA TAGACCTCGG TCAGCCTGAC GAGGCGCGCA TCCGCCGCGC GTGCAGCCGC 
GCCGCGCAGG TCGTCGTACT GTGCTACAGC AGCAGCTGCG AGGTCTGGTG GAAACAGATC 
GCCGGCAAGC TCGCGCGCTT CAGCAATCTG ACTGTGCTGC AGCTCGCGGC CGATACCGCA 
CAGGCGCTCG CCGGCCTCGC GACGCGCGGG ATGCGCCTGC AATGCATGGT GCAGGACGGC 
GAAATCTGGC TCAACAGCGA GACCGAGAGC GTGGCGGTGA AGCTGACTGC GCTCATGTCG 
CCGCGCTGA
 
Protein sequence
MGIPEIYGRR AVSYAAVCRN STMALKATIY KADLQVADMD RHVYGDHALT LARHPSESEE 
RMMVRVLAYA LHAQDGIAFT KGLFDVDEPE VWVKNLAGEI TLWIDLGQPD EARIRRACSR 
AAQVVVLCYS SSCEVWWKQI AGKLARFSNL TVLQLAADTA QALAGLATRG MRLQCMVQDG 
EIWLNSETES VAVKLTALMS PR