| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tbd_0671 |
|---|
| Symbol | |
|---|
| ID | 3672636 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Thiobacillus denitrificans ATCC 25259 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007404 |
|---|
| Strand | + |
|---|
| Start bp | 712034 |
|---|
| End bp | 713815 |
|---|
| Gene Length | 1782 bp |
|---|
| Protein Length | 593 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 67% |
|---|
| IMG OID | 637709343 |
|---|
| Product | putative adenylate/guanylate cyclase |
|---|
| Protein accession | YP_314429 |
|---|
| Protein GI | 74316689 |
|---|
| COG category | [T] Signal transduction mechanisms |
|---|
| COG ID | [COG2114] Adenylate cyclase, family 3 (some proteins contain HAMP domain) |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 19 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 14 |
|---|
| Fosmid unclonability p-value | 0.810132 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | TTGGACGAAC CGGCCCGCTG CGCTAGGGTT GAGGGTATCG AGCAGCCAGG AGATCGCGTG
CGCCTTCCCA TCAGCCTGAA GATCTTCAGC ATCACGACCG CACTCCTTGT GCTGATGGTC
GCCGTCACCT GGCTCTCGGT GCTCAATTTC CGGCATCTCA ACGGCCAGGT CCGCGCGCTT
TCGGACTGGT ACCTGCCGCT CGAGCAGCAG GTCGCGAGCG TCGAAATCCT GATCCGTCAG
CAGATGGTGC ACATGGAGCG GGTCATGGCC GGCATCGAAG CAGCGCGGCC CGACCCCGAC
TATCTGGCGC GGGAGTCGAC CAGCTTCGAT GCGCGCGGCG TCAACGCCGA CCAGATCATC
GATTCCTCGC TGCGCTTTCT CGCCGAGGCC GACGCCGAGA AGGCGATCGA TCTCGACCGC
GTGACGCTCG CCAAGCTGGC CGAGCAGTTG CCGGCGATCC AGACCGCGCG CCAGCAGTTC
CACCGCACCT TCCGCCTGTT CCAGATCGAG GCCGAGGAAG GCACGCCGCG CTCGCAGAAC
CTCGTGCGCG ACGCTCTGCT GCGCGAGAAG GACCGGGTCG ACGTCGAGAT CGGCAAGACC
ATCGAGCTCC TCGCCAAGCT CACGCAGGAC ACCGCTGCCG CGGCCAAGGC CGAGGAGGCG
CGCGCGACCA CGCTGAACTG GATCGTGACC GGCGTCGCCA CCCTGCTGGG TCTCATCTTC
GCGACCTTCG TCACGCGCTC GCTCGTCGAC TCGGTCCGGC GCCTGGTAGG CGGCACCCAG
GCCGTCGAAG CCGGCGACCT CGGCGTCGAG ATCCGCGTGC GCACGCGCGA CGAGATGGCG
ACGCTGGCAA GCTCGTTCAA CCACATGGTC CTCGGCCTGC GCGAGAAGGA GCGCATCCGC
GAAACCTTCG GCCAGTACGT CGACCCGCGC ATCGTCAAGA GCCTGCTCGA CAACCGCATC
GCGGCGGACC GCGGGCAGCG CGAGGTCATG ACCGTGTTCT TCTCCGACCT CGAAGGCTTC
ACGCGCATGT GCGAGGACCT CACGCCTGAC GCGGCAGTCC GCTTCCTCAA CCGCTACTTC
GCGATGATGT CCGAGGTCAT CCGCGGCCGT CAGGGCATCG TCGACAAGTA CATCGGCGAT
TCCGTCATGG CGTTCTGGGG TCCGCCGTTC ACCGACGCGA AAGGCCACGC GCAGCTCGGC
TGCCTCGCCG CACTCGACCA GATGGCGAAG ATGGACGCCT TCCGCGCCAG CCTGCCCGAG
CTTTTCGGCG TCAAACACGG CCTGCCCGAC GTCCAGGTGC GCATGGGCAT CGCGAGCGGC
GAGGTCACCG TCGGCAACAT CGGCTCGGAA ACCTCGCGCG GCTACACCGT CATCGGCGAC
ACCGTGAACC TCGCCTCACG CCTCGAGCAG GCCAACAAGT TCTACGGCAC GCGCATCCTC
GTCAGCGAGG GCACGCGAAA GCTCGCCGGG GATGACTTCG CCGTCCGCGA AATCGACAGC
CTGCGCGTCG CCGGCAAGCT GCAGCCCGTG CGTGTGTACG AATTGCTCGG CATGGCGAAC
GAATTGAGCG AAGCGAGCCG GCTGGCCGTC ACGGCGTACG AAGCCGGGCT CGCTCGTTAT
CGTGCGGAAG ACTGGACGGC GGCTGAAGCG GCGTTCAGGG AATGTCTGGC GAAGGCGCCG
GGCGATCGGC CCAGTGCGGT GATGCTGGCG CGGGTCGAGG CGTTCAGGAA AGCACCGCCG
GTGGCCGGGT GGAAGGGGGT CTGGGTGGCG GGGAGCAAGT GA
|
|---|
| Protein sequence | MDEPARCARV EGIEQPGDRV RLPISLKIFS ITTALLVLMV AVTWLSVLNF RHLNGQVRAL
SDWYLPLEQQ VASVEILIRQ QMVHMERVMA GIEAARPDPD YLARESTSFD ARGVNADQII
DSSLRFLAEA DAEKAIDLDR VTLAKLAEQL PAIQTARQQF HRTFRLFQIE AEEGTPRSQN
LVRDALLREK DRVDVEIGKT IELLAKLTQD TAAAAKAEEA RATTLNWIVT GVATLLGLIF
ATFVTRSLVD SVRRLVGGTQ AVEAGDLGVE IRVRTRDEMA TLASSFNHMV LGLREKERIR
ETFGQYVDPR IVKSLLDNRI AADRGQREVM TVFFSDLEGF TRMCEDLTPD AAVRFLNRYF
AMMSEVIRGR QGIVDKYIGD SVMAFWGPPF TDAKGHAQLG CLAALDQMAK MDAFRASLPE
LFGVKHGLPD VQVRMGIASG EVTVGNIGSE TSRGYTVIGD TVNLASRLEQ ANKFYGTRIL
VSEGTRKLAG DDFAVREIDS LRVAGKLQPV RVYELLGMAN ELSEASRLAV TAYEAGLARY
RAEDWTAAEA AFRECLAKAP GDRPSAVMLA RVEAFRKAPP VAGWKGVWVA GSK
|
|---|
| |