| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tbd_0658 |
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| Symbol | |
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| ID | 3672623 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thiobacillus denitrificans ATCC 25259 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007404 |
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| Strand | + |
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| Start bp | 698676 |
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| End bp | 699311 |
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| Gene Length | 636 bp |
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| Protein Length | 211 aa |
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| Translation table | 11 |
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| GC content | 72% |
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| IMG OID | 637709330 |
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| Product | ribosomal large subunit pseudouridine synthase A |
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| Protein accession | YP_314416 |
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| Protein GI | 74316676 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0564] Pseudouridylate synthases, 23S RNA-specific |
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| TIGRFAM ID | [TIGR00005] pseudouridine synthase, RluA family |
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Plasmid Coverage information |
| Num covering plasmid clones | 30 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACGATCG ATCCCCTTTA CGCTGACGAC TGTCTGCTCG TGTTCGACAA GCCGAGCGGC
CTGCTCGCGG TGCCCGGGCG CGGCCCCGAC AAGCAGGATT GCCTCGCGGC GCGCGCGCAG
GCCTGTTACC CGGACGCCCT CGTCGTGCAT CGCCTGGACA TGGCGACCTC CGGCCTGATG
GTCATGGCGC GCGGCACGTA CGCCCAGCGT GCATTGAGCA GGGCGTTCGC CGCGCGCGAG
GTCGAGAAGC GTTACGTCGC GGTCGTCGCC GGGCATCCCG CCGCGCCGCA AGGAGCCTGG
GGCACGATAG ACCTGCCGCT CGTCGTCGAC TGGCCCAACC GACCGCTGCG CATCGTCGAC
GCGGTGCGCG GCAAACCGAG CGTGACGCGC TGGCGCGTGC TCGGGCCTGC CGGTGCGGAC
GGGACGCGTG TCGAACTCGA GCCCGTGACC GGGCGCTCGC ACCAGTTGCG CGTGCATCTG
CGCGAAATCG GCCACCCCAT CCTCGGCGAC GCGCTCTACG CACCGCCCGC AGTGCAGGCG
CAGGCCTCGC GGCTGCTCCT GCATGCCCGC TCGCTCGGCC TCGCTCACCC GGCGACCGGG
GAATGGATGC GGTTCGAGGC GCCGCAGCCC TTCTGA
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| Protein sequence | MTIDPLYADD CLLVFDKPSG LLAVPGRGPD KQDCLAARAQ ACYPDALVVH RLDMATSGLM
VMARGTYAQR ALSRAFAARE VEKRYVAVVA GHPAAPQGAW GTIDLPLVVD WPNRPLRIVD
AVRGKPSVTR WRVLGPAGAD GTRVELEPVT GRSHQLRVHL REIGHPILGD ALYAPPAVQA
QASRLLLHAR SLGLAHPATG EWMRFEAPQP F
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