| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tbd_0644 |
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| Symbol | |
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| ID | 3672609 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thiobacillus denitrificans ATCC 25259 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007404 |
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| Strand | - |
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| Start bp | 682954 |
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| End bp | 684036 |
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| Gene Length | 1083 bp |
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| Protein Length | 360 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 637709316 |
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| Product | L-alanine dehydrogenase |
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| Protein accession | YP_314402 |
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| Protein GI | 74316662 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0686] Alanine dehydrogenase |
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| TIGRFAM ID | [TIGR00518] alanine dehydrogenase |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.0163918 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 0.784685 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCACATAG GCATCCCGAA GGAAATCAAG GACCACGAAT ACCGCGTCGC GCTCACCCCC
GAAGGCGCGC GTTCGCTCGT CGATGCCGGC CATGCGGTGA GCGTCGAGAG CCACGCCGGC
GCCGCGGTCG GCTTCGGCGA CGACGCCTAC CGCGCCGCGG GTGCGACCGT CGTGCCGGAT
GCAGCCGGCG TGTGGGCGGC CGAGCTCGTC GTCAAGGTCA AGGAACCGCA GCCGCAAGAG
ACACAGCGGC TCCGGGCGGG GCAGCTGCTT TTCTGCTATC TGCACCTCGC GGCAGCGCCC
TCGCTCGCGC GCGAACTCAT GACGCGCGGC GTCAGCGCGA TCGCCTACGA AACCGTCGTC
GGCCCCGCGG GCGGCCTGCC GCTGTTGCAG CCGATGTCCG ACATCGCGGG CCGGCTCGCC
CCGCAGATGG GCGCGCTCGG GCTGCACAGC TCGCACGGCG GCAACGGCAA GCTGATCAGC
GGCCTGCCCG GCGTCGCGCC GGCCCACGTC CTCGTCATCG GCGCCGGCGT CGTCGGCATG
GCAGCGGTGC GCACAGCGAT CGGCCTCGGT GCACGCGTCA CCCTCATCGA CCGCCTGCGC
GACAAGCTCG CGCAGGCCGA AACCCTGTTC GGCGCGCGCG TCGAGACGCG CTTTTCGTCG
CCCGACGCGA TCGCCGAATG CGTCGAGCAG GCCGACATCG TGATCGGCGC GGCGCAGATC
CCGGGGCGCC ACGCGCCCCG CCTGATCAGC CTCGACCTGC TGCGCCGCAT GGGCGCCGGC
AGCGTGCTCG TCGACGTCGC GATCGACCAG GGCGGCATCG CCGAAACCTC GCGCCCGACC
ACCCACAGCG ACCCTTTCTT CACGGCCGAA GGCGTCGTCC ATTACTGCGT CACCAACATG
CCCGGTGCCG TCGCCCGCAC CGCAACCGAA GCGCTGACCC ACGCGACGCT GCCCTACGTT
GAGGCACTCG CCGCGCAAGG CCTCGAAGCG CTCGCCGCCG ACCCCGGACT GCACGCCGGG
CTGCACGTCC ACGCCGGCAA GATCATGCAC GCCGGGCTCG CACTCGATCT CAACTTCGAC
TGA
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| Protein sequence | MHIGIPKEIK DHEYRVALTP EGARSLVDAG HAVSVESHAG AAVGFGDDAY RAAGATVVPD
AAGVWAAELV VKVKEPQPQE TQRLRAGQLL FCYLHLAAAP SLARELMTRG VSAIAYETVV
GPAGGLPLLQ PMSDIAGRLA PQMGALGLHS SHGGNGKLIS GLPGVAPAHV LVIGAGVVGM
AAVRTAIGLG ARVTLIDRLR DKLAQAETLF GARVETRFSS PDAIAECVEQ ADIVIGAAQI
PGRHAPRLIS LDLLRRMGAG SVLVDVAIDQ GGIAETSRPT THSDPFFTAE GVVHYCVTNM
PGAVARTATE ALTHATLPYV EALAAQGLEA LAADPGLHAG LHVHAGKIMH AGLALDLNFD
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