| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tbd_0632 |
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| Symbol | |
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| ID | 3672597 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thiobacillus denitrificans ATCC 25259 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007404 |
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| Strand | - |
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| Start bp | 669007 |
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| End bp | 671298 |
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| Gene Length | 2292 bp |
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| Protein Length | 763 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 637709304 |
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| Product | RND efflux transporter |
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| Protein accession | YP_314390 |
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| Protein GI | 74316650 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG1033] Predicted exporters of the RND superfamily |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.510967 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 10 |
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| Fosmid unclonability p-value | 0.17381 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCAGACGC TCAAGGCATT GGCGAGCGGC AGCCGGGTTC CCTTGCTGCC GCCCTGGGTG
GCGCTGGCCC TGCTGCTCGG CATCCTGCTC GCGTCGATCC CCTTCGTCCT CAAGCTGCAT
TTCAACAACG CGCCGGACAT CTATTCCCCG CCCGATTCGC CGACCATCGC GTTGCGCGAA
TCGCTGTTCC GCGAATTTCC CAACGACGAA GCCGTCATCG CGCTATTCGA GGGCGATGCG
CTCTACACCC CGGCCTTTCT CGCCGCGCTC GACCGCGCGG CGCGGACGAT GGCGCGGCAT
CCGGCCGTCG ACCGTGTCCT CACGCTGACG ACGGTCGAGC ACGTCGACGC GAGCGACGAC
GGCTTCGCGG TCTCGCCGCT GGTCGACGCC GACGCGCTCG ACACGCGCAC GCCGGCCCAA
TGGAAAGCAC GGGTGCTCGG CGACGCCTTC GCGCCGGGGC TGATCGCGTC GCGCGACGGG
CGCGCCGTCG CCCTCGTCGT GCGGCCGAAA ATCCTCAAGG AAAGCCTCGC CCGCCGCGAC
ATCGCCGTGG CGCTCGAGGC CGCGATCGCG GCGGAGAAGC TCGCGCCCTA CCAGACGGCG
ACCGCGGGTA CGGTCGCGCA GACGGTCGAG GAGTTGCGCT CGATCTGGCG CGACAGTGCA
GTCTTCATCC CGCTCACCAT CGTGATCGGT CTCGCGCTGA TGGGATGGGT CGTCGGCCGC
GTGCGGCCGG TCATCGTCGG GGGACTCGCG ATGGCCACCG TCGTCTGCGC CAGCGTCGCC
GGGCTCGTCA TCACGGGCCA GCCCTACACG CCGATCACGG CAATGATTCC GACGCTGATG
GCGGCCTACA CCACGGCGAC GCTGCTGCAT TTCTACGCCG CGGTCCAGCG TGCGCGCATC
GCGCTTCTGC CGCGCCCCAA GCGCATCGCG CGCGCCCTCA AGGACACCTT CACCCCCGGT
CTCTTCAACG TGCTGACGAC CGGGGCGGGG CTGCTCAGTC TGCTGTGGGT CGACATTCCC
CCGGTGCAGG CCTTCGGCCT GGCGGGCGCG GTCGGCACGC TGATGGTGTT CCTGGTCGTG
TTCGTCCTGG TGCCGCCGAT CCTGCTCAAG TGGGACACGC CGCGCTGGCC GCGCCGGCGC
TCGGGCCTCG CGCACGCCCG GCGCATCGCC GCGGCGGTCG CGGTATTCAG CCTGCGCCAC
GCGGGCGCGG TGCTGGCGAC GACAGCGGTA CTCGTGGTGG CGACGATCCC GCTGGTCATG
CAGGTCAAGG TCGAGTCCAA CATCATCGAA TTCTTCGCCC CCGAGCACCG CATCAGCCGC
AGCACGAGCC GCGTCGAAGA CCGGCTTTCC GGCGTGACAG GCCTCGAAAT CGTGCTGACC
GGCGCCACGC GCGACAGCCT CAAGGACCCG GCGACGCTGG CCCGCATCAA GGCGCTGCAG
ACCTGGGCGA CGCAACAACC GGAGGTCGAC CGCGCCTTTT CGCTGGTCGA CGTGCTCGAG
GAAATGAACC GCGCGTTCCA CGACGAGGAT CTGGGTGGGA ACGCCCTGCC CGACAACCGG
CGGCTGGTCG AGCAACTCCT GCTGATCTAT GACGGCGAGG ATTTGTACGA ACTCGTCAAC
CGCGAGTTCC AGCGCGGCCG CATCACGCTC AGTCTCAACG TCCACGGCGC CAACGAAATC
AGCCAGGTGA TCGAGCGCGT GCGTCAACGC GTCGCCGCGC AGCCGATTCC GGGCGTCGCC
GTCGAACTCG CGGGCTACGG GCGGCTCTTC TCGGATCAGG AGGACCGCAT CGTCGACGGC
CAGGTCAAGA GCTTCTCCTC GGCCTTCCTG CAAATCCTGG TGCTACTGAC GCTGCTCTTC
CGTTCCTTCC GCGGCGCACT GATCTGTCTC GTCCCCAATC TCGCCCCGCT CTTCTTCATC
TTCGTCGTCA TGGGCGCCTT CGGCATCTGG CTAGACGTGG CCACGGTGTT GATCGCAGGC
GTCATTCTCG GCATCACGGT CGACGACACG ATCCACCTCT ATCACGGCTA TCTGCACCGC
ATCCGCCGCG GCGTCAGCCC GGTCTTCGCG ATCATCCGCA GCGTCGAGAG CTCGGGGCGC
GCGGTCGTCG CGATCTCGGT CGTCCTGATC GCGCAGTTCA GCCTGCTGGG AACCTCAGAT
TTTCGGCCCA CCGCGCATTT CGGCGTGCTC TGCGCGGTGG GCCTGTTCGC GGGCCAGGTC
TTCGAGCTGC TGCTGATGCC TGCGCTGCTC GGCCTGCGCG TGCCGCGGCG GGCTAAGGCA
CGGTCAGCCT GA
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| Protein sequence | MQTLKALASG SRVPLLPPWV ALALLLGILL ASIPFVLKLH FNNAPDIYSP PDSPTIALRE
SLFREFPNDE AVIALFEGDA LYTPAFLAAL DRAARTMARH PAVDRVLTLT TVEHVDASDD
GFAVSPLVDA DALDTRTPAQ WKARVLGDAF APGLIASRDG RAVALVVRPK ILKESLARRD
IAVALEAAIA AEKLAPYQTA TAGTVAQTVE ELRSIWRDSA VFIPLTIVIG LALMGWVVGR
VRPVIVGGLA MATVVCASVA GLVITGQPYT PITAMIPTLM AAYTTATLLH FYAAVQRARI
ALLPRPKRIA RALKDTFTPG LFNVLTTGAG LLSLLWVDIP PVQAFGLAGA VGTLMVFLVV
FVLVPPILLK WDTPRWPRRR SGLAHARRIA AAVAVFSLRH AGAVLATTAV LVVATIPLVM
QVKVESNIIE FFAPEHRISR STSRVEDRLS GVTGLEIVLT GATRDSLKDP ATLARIKALQ
TWATQQPEVD RAFSLVDVLE EMNRAFHDED LGGNALPDNR RLVEQLLLIY DGEDLYELVN
REFQRGRITL SLNVHGANEI SQVIERVRQR VAAQPIPGVA VELAGYGRLF SDQEDRIVDG
QVKSFSSAFL QILVLLTLLF RSFRGALICL VPNLAPLFFI FVVMGAFGIW LDVATVLIAG
VILGITVDDT IHLYHGYLHR IRRGVSPVFA IIRSVESSGR AVVAISVVLI AQFSLLGTSD
FRPTAHFGVL CAVGLFAGQV FELLLMPALL GLRVPRRAKA RSA
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