Gene Tbd_0626 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTbd_0626 
Symbol 
ID3672591 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThiobacillus denitrificans ATCC 25259 
KingdomBacteria 
Replicon accessionNC_007404 
Strand
Start bp658885 
End bp660333 
Gene Length1449 bp 
Protein Length482 aa 
Translation table11 
GC content73% 
IMG OID637709298 
Producthypothetical protein 
Protein accessionYP_314384 
Protein GI74316644 
COG category[G] Carbohydrate transport and metabolism
[S] Function unknown 
COG ID[COG0062] Uncharacterized conserved protein
[COG0063] Predicted sugar kinase 
TIGRFAM ID[TIGR00196] yjeF C-terminal region, hydroxyethylthiazole kinase-related
[TIGR00197] yjeF N-terminal region 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.0494651 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value0.803312 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTTCCGAC CTCCGCCCCG CTGCCGTGCC ATGTCGCCCC TGTCCGCCCC GCTCTCGCCC 
CCGCTCTACA CGACCGCCGA GCTGCGCGCC GTCGAGACGA GATTCGCCGC CGACGGGCTG
ATGGAAAGGG CGGGCGCCGC GGCGGCGGAA CTGGCGGCTT CGCTCGCGGG AGAGGCCGGC
GGCCCGGTCC TCGTCCTCGT CGGTCCGGGC AACAATGGCG GCGACGCCTT GGTCGCCGCG
CGCCTGCTCG CCGCAGAGGG CTCGCCCGTG CATGCAGTCG GCGGCGCCGA TCCGGCCCGT
CTGCCAGCCG ACGCGGCACG CGCCCACGCG GCCTGGCGGC AGGCAGGGGG GACCCTGCAG
CGCGAGATCC CGTCACGCCG TTTCGGTCTG GTCGTCGACG GCCTGTTCGG CGCGGGACTG
CAGCGCGACG TGGCGGGAAA CGAGGCGCAC TGGATCGCGC AGGCCAACGC GCTCGGATGT
CCAAGACTCG CGCTCGACGT GCCGAGCGGG CTCGACAGCG ACAGCGGGCG CGCGCGCGGC
TGCGCGTTTC GGGCCGACCA CACGCTCACC TTCCTCGGCC TCAAGCCCGG GCTCCTGACC
GCCGACGGCC CCGACTACGC CGGGCAGGTG CATCTCGACA CCCTCGGTAT CGATCCGGCC
GACATGCCGT CGGTGAAGGG GATTGCGCTC ACCGGCCTCG ACGCGCGCCA TCGTCTGCCG
CCGCGTGCGC AGAACAGCCA CAAAGGGCAG TTCGGCCACG TCGCCATCGT CGGCGGCGCG
CCGGGCATGG TCGGCGCCTG CCTGCTCGCC GGACGCGCGG CGCTCGCGCA GGGCGCCGGC
AGCGTCAGCG TGGCGGTATT GGACGATCGG GTCGCGGTCG ACTACGGCGC GCCGCGTTTG
ATGTTCGCCA GCGCAGAAGC GCTGGTCGAG GCATCGCTCG ACGTTCTCGC CCTGGGCCCC
GGGCTCGGTC GCAGCCCGCG CGCCCGCGCA CTCTTGCAGA CGGCACTGGG CGCGGACTGC
CCGCTCGTGC TCGACGCCGA CGCGTTGAAT CTCATCGCCA CCGACCCTGA ACTCGGCCTC
GCCGCGGCAC AGCGCAACGC GGCCACGGTG CTCACGCCCC ACCCCGGCGA AGCCGGCCGC
CTGCTCGGCG TCGACACGCA AGCGGTCCAG GCCGACCGCG TCGGCGCAGC ACATGAACTG
AGTACGCGCT TTGGCGCCCA CGTCGCGCTG AAGGGCGCCG GCACCGTGAT CGCGCATCCG
GGAGGGCGCT ATGCGATCAA CACGAGCGGC GGCCCCTGGC TCGCGCAGGC GGGCTCGGGA
GACCGCCTAA CCGGCATGGT CGCCGCGCTT TTAGGGCAGG GAATGGAAAC CGGAAATGCG
CTCGAGGCCG CGGTCTGGCT GCACGGCGCA GACCGGCCCG AGCATCAGCA CATCCGCGTC
TTGAGGTAG
 
Protein sequence
MFRPPPRCRA MSPLSAPLSP PLYTTAELRA VETRFAADGL MERAGAAAAE LAASLAGEAG 
GPVLVLVGPG NNGGDALVAA RLLAAEGSPV HAVGGADPAR LPADAARAHA AWRQAGGTLQ
REIPSRRFGL VVDGLFGAGL QRDVAGNEAH WIAQANALGC PRLALDVPSG LDSDSGRARG
CAFRADHTLT FLGLKPGLLT ADGPDYAGQV HLDTLGIDPA DMPSVKGIAL TGLDARHRLP
PRAQNSHKGQ FGHVAIVGGA PGMVGACLLA GRAALAQGAG SVSVAVLDDR VAVDYGAPRL
MFASAEALVE ASLDVLALGP GLGRSPRARA LLQTALGADC PLVLDADALN LIATDPELGL
AAAQRNAATV LTPHPGEAGR LLGVDTQAVQ ADRVGAAHEL STRFGAHVAL KGAGTVIAHP
GGRYAINTSG GPWLAQAGSG DRLTGMVAAL LGQGMETGNA LEAAVWLHGA DRPEHQHIRV
LR