Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Tbd_0626 |
Symbol | |
ID | 3672591 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Thiobacillus denitrificans ATCC 25259 |
Kingdom | Bacteria |
Replicon accession | NC_007404 |
Strand | - |
Start bp | 658885 |
End bp | 660333 |
Gene Length | 1449 bp |
Protein Length | 482 aa |
Translation table | 11 |
GC content | 73% |
IMG OID | 637709298 |
Product | hypothetical protein |
Protein accession | YP_314384 |
Protein GI | 74316644 |
COG category | [G] Carbohydrate transport and metabolism [S] Function unknown |
COG ID | [COG0062] Uncharacterized conserved protein [COG0063] Predicted sugar kinase |
TIGRFAM ID | [TIGR00196] yjeF C-terminal region, hydroxyethylthiazole kinase-related [TIGR00197] yjeF N-terminal region |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.0494651 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 14 |
Fosmid unclonability p-value | 0.803312 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGTTCCGAC CTCCGCCCCG CTGCCGTGCC ATGTCGCCCC TGTCCGCCCC GCTCTCGCCC CCGCTCTACA CGACCGCCGA GCTGCGCGCC GTCGAGACGA GATTCGCCGC CGACGGGCTG ATGGAAAGGG CGGGCGCCGC GGCGGCGGAA CTGGCGGCTT CGCTCGCGGG AGAGGCCGGC GGCCCGGTCC TCGTCCTCGT CGGTCCGGGC AACAATGGCG GCGACGCCTT GGTCGCCGCG CGCCTGCTCG CCGCAGAGGG CTCGCCCGTG CATGCAGTCG GCGGCGCCGA TCCGGCCCGT CTGCCAGCCG ACGCGGCACG CGCCCACGCG GCCTGGCGGC AGGCAGGGGG GACCCTGCAG CGCGAGATCC CGTCACGCCG TTTCGGTCTG GTCGTCGACG GCCTGTTCGG CGCGGGACTG CAGCGCGACG TGGCGGGAAA CGAGGCGCAC TGGATCGCGC AGGCCAACGC GCTCGGATGT CCAAGACTCG CGCTCGACGT GCCGAGCGGG CTCGACAGCG ACAGCGGGCG CGCGCGCGGC TGCGCGTTTC GGGCCGACCA CACGCTCACC TTCCTCGGCC TCAAGCCCGG GCTCCTGACC GCCGACGGCC CCGACTACGC CGGGCAGGTG CATCTCGACA CCCTCGGTAT CGATCCGGCC GACATGCCGT CGGTGAAGGG GATTGCGCTC ACCGGCCTCG ACGCGCGCCA TCGTCTGCCG CCGCGTGCGC AGAACAGCCA CAAAGGGCAG TTCGGCCACG TCGCCATCGT CGGCGGCGCG CCGGGCATGG TCGGCGCCTG CCTGCTCGCC GGACGCGCGG CGCTCGCGCA GGGCGCCGGC AGCGTCAGCG TGGCGGTATT GGACGATCGG GTCGCGGTCG ACTACGGCGC GCCGCGTTTG ATGTTCGCCA GCGCAGAAGC GCTGGTCGAG GCATCGCTCG ACGTTCTCGC CCTGGGCCCC GGGCTCGGTC GCAGCCCGCG CGCCCGCGCA CTCTTGCAGA CGGCACTGGG CGCGGACTGC CCGCTCGTGC TCGACGCCGA CGCGTTGAAT CTCATCGCCA CCGACCCTGA ACTCGGCCTC GCCGCGGCAC AGCGCAACGC GGCCACGGTG CTCACGCCCC ACCCCGGCGA AGCCGGCCGC CTGCTCGGCG TCGACACGCA AGCGGTCCAG GCCGACCGCG TCGGCGCAGC ACATGAACTG AGTACGCGCT TTGGCGCCCA CGTCGCGCTG AAGGGCGCCG GCACCGTGAT CGCGCATCCG GGAGGGCGCT ATGCGATCAA CACGAGCGGC GGCCCCTGGC TCGCGCAGGC GGGCTCGGGA GACCGCCTAA CCGGCATGGT CGCCGCGCTT TTAGGGCAGG GAATGGAAAC CGGAAATGCG CTCGAGGCCG CGGTCTGGCT GCACGGCGCA GACCGGCCCG AGCATCAGCA CATCCGCGTC TTGAGGTAG
|
Protein sequence | MFRPPPRCRA MSPLSAPLSP PLYTTAELRA VETRFAADGL MERAGAAAAE LAASLAGEAG GPVLVLVGPG NNGGDALVAA RLLAAEGSPV HAVGGADPAR LPADAARAHA AWRQAGGTLQ REIPSRRFGL VVDGLFGAGL QRDVAGNEAH WIAQANALGC PRLALDVPSG LDSDSGRARG CAFRADHTLT FLGLKPGLLT ADGPDYAGQV HLDTLGIDPA DMPSVKGIAL TGLDARHRLP PRAQNSHKGQ FGHVAIVGGA PGMVGACLLA GRAALAQGAG SVSVAVLDDR VAVDYGAPRL MFASAEALVE ASLDVLALGP GLGRSPRARA LLQTALGADC PLVLDADALN LIATDPELGL AAAQRNAATV LTPHPGEAGR LLGVDTQAVQ ADRVGAAHEL STRFGAHVAL KGAGTVIAHP GGRYAINTSG GPWLAQAGSG DRLTGMVAAL LGQGMETGNA LEAAVWLHGA DRPEHQHIRV LR
|
| |