Gene Tbd_0560 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTbd_0560 
Symbol 
ID3673670 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThiobacillus denitrificans ATCC 25259 
KingdomBacteria 
Replicon accessionNC_007404 
Strand
Start bp588788 
End bp589381 
Gene Length594 bp 
Protein Length197 aa 
Translation table11 
GC content64% 
IMG OID637709231 
Productputative additional subunit of nitric oxide reductase (Nor) complex, membrane protein 
Protein accessionYP_314318 
Protein GI74316578 
COG category[C] Energy production and conversion 
COG ID[COG1845] Heme/copper-type cytochrome/quinol oxidase, subunit 3 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.0830367 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGAACGTCT CCCTAACAAT TCCAACACCC CATCGCGAGC CCCGGGCACT GCCGGGCGAT 
CTCGCGATGT GGTTTTTCAT CCTCGCCGAA CTGCTGGTGT TCGGCGTCTT CTTTCTCGCG
TACGCGTTCG CGCGGGCGCG CAATGTCGAA TTGTTCAACG CGTCGCAACT CGCACTCAGC
CAGCTGAGCG GCGCGATCAA TACCGTGCTG CTGATCACCA GCAGCTATTT CGTCGTCCGC
GCCGTCGACC GGGTCCGGCG CGGACACTCC CGCCCTGCGG CCGTCTGGCT CGGCGCCGCG
ATGGCCTGCG GCGGCACCTT CCTCGTGCTC AAGCTGGCCG AACTCGGCGG AAAAATGAGT
GCCGGGATCA CGATGTCGAC GAACGTCTTC TACATGTTCT ACCTCGGCCT CGGCGCCTTC
CACTTCATGC ACGTCGTGCT CGGCATGGTC ATCCTCGGCG CGATCACGCT CAAGGCCTGG
CAGGGCGGCT ACAGCGCCGC GAATCACGGC GGCGTCGAAA CCGGCGCGGC CTACTGGCAC
ATGGTGGACC TCGTGTGGAT CGTGCTCTTC CCGCTGATTT ACGTGCTGCG CTGA
 
Protein sequence
MNVSLTIPTP HREPRALPGD LAMWFFILAE LLVFGVFFLA YAFARARNVE LFNASQLALS 
QLSGAINTVL LITSSYFVVR AVDRVRRGHS RPAAVWLGAA MACGGTFLVL KLAELGGKMS
AGITMSTNVF YMFYLGLGAF HFMHVVLGMV ILGAITLKAW QGGYSAANHG GVETGAAYWH
MVDLVWIVLF PLIYVLR