Gene Tbd_0555 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTbd_0555 
Symbol 
ID3673665 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThiobacillus denitrificans ATCC 25259 
KingdomBacteria 
Replicon accessionNC_007404 
Strand
Start bp584435 
End bp586279 
Gene Length1845 bp 
Protein Length614 aa 
Translation table11 
GC content69% 
IMG OID637709226 
Productputative nitric oxide reductase activation protein 
Protein accessionYP_314313 
Protein GI74316573 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG4548] Nitric oxide reductase activation protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGAAGAAT TCGTCGGCGG CCTCTGGGAC AAGCTGATCA CCCGCACCGC GCACCGCGGC 
TTTCCGAAGG CACGGGTGAC GCTGCGCGAA ATCGATCCGA TCGCGCCGAT CTTCTTCCGC
GCCCTCGGCG GCGACCCCGG ACTGAGCGTG CGCGCCGGCA CGGCGACGGC CCACGGCGCG
CGGCGCAGCT GGATGGAACG CGTCGCCGGC GTCGGCGAAA AGATCGAGCT CGCCTGGAGC
GACGACACCA CACTGCATCT GCCCGCCGAA CTCGACGTCT TCCCGGAGCG CGCACAGAAC
CGCGAACTCT ACCTCTGGCT GCTCGCGCTC GCGGCGCACG ACGTCGCACC CCAAGCCCCG
TGGATCGTGC GCAATCAGGC CGCGACACGC GCCGCGCTGG CAGCCCTGCC CGGCCTCGCG
CCGCGCTATC GCCGGCTCGT CGGGGACCTG CTGAATCTGC GGCCGAAGCC CGAGCGCTTG
CGCGACCAGG AAGCCGCGGC CGAGGCGGCG ATCCGCGCTG CGCTCACCGA ACCCGGCTCA
GTCACCGACT TCATGGCGGG CAAGCACCCG CCGATGCCCG TTCCGCTGTG GTTGCATCCG
ACGCCGCCCG TCAATACCGG CGACGCCCGC CAGGCCGGCA GCGCGAAGTC GCCGCAGCCG
GGCAGCGCCA AGTCGCAGGC CGACGAGGAA GCGCGCAAGC GCCGCGCCGA ACGGGTCGAG
ATGCCCGAGG CGAAGAGCCC CTTCATGCTG CTCTTCCGCG CTGAAAGCCT CTTTTCCTGG
GCGGAATTCG TCAAGGTCGA CCGCCCGCTC GACGAAGACG AGAACGAACA CGCGGCCAAG
GCGGCGAACG ATCTCGACAT CTTGAGCGTC GCCGACGACG ACAAGAGCAC CGCGGCGAGC
CGCGTGCGCT TCGATCTCGA CCTTCCGGCC GAGGCCGACG ACGACCTCGT GCTCGCCGAC
GGCATCCTGC TGCCGGAGTG GAACTACCGC AAGCAGCGCT TGCAGCCCGA CCATTGCCGC
CTGCAGATGA TGGTCGCGCG CGACGCCGAG CCCTGCCCGC TGCCGCAGAC CCTGCGCGCG
CCGGCGAAGC GGCTGCGCCA GCAATTCCAG GCGTTGACGA CGCAGCGCGC CCGCCTGCGT
GCGCAACTGT CCGGAAGCGA CCTCGACATC GACGCCTGCG TGCGCTTCGC GGCCGACAAG
ATCGACGGCG TACGCAGCAG CGAGCCGGGC CTCTATGTCG ACAGCCGCAA GCAGCAGCGC
GACTTGTCCT GCCTGCTGCT GGCCGATCTG TCGCTGTCGA CCGACGCCTG GGTCAACAAC
AGCGCGCGCG TGATCGAGGT GATCCGCGAC AGCCTGTTGC TGTTCGGCGA AGCGCTGGCC
GCGACCGGCG ACCGCTTCGC GCTCTACGGC TTCTCGTCGG TGCGGCGCGA CAACGTGCGC
TTTCACCTGC TCAAGGGCTT CGACGAACGC TACGACGACG GCATCCGCGG CCGCCTCGCG
ACGCTCAAGC CCGGCTATTA CACGCGCATG GGCGCGGCGA TCCGCCACGC CGCCGCGATT
CTCGCGACCC GCAAGTCGAG CCGTCGCCTG CTGCTGATCC TGACCGACGG CAAGCCCAAC
GACCTCGACA AGTACGAAGG CCGCTATGGC ATCGAGGACA CGCGCATGGC GATCCTCGAA
GCCCGGCGCC AAGGGCTCAC GCCGTTTTGC GTGACGATCG ACGAGGCGGC CGGCGATTAC
CTGCCGCATC TGTTCGGCGC AAGCGGCTTC GTCGTCGTCC ACGACGCGGC CATGCTGCCG
CAGGTCCTGC CGAGCCTTTA CGCGCGGCTT ACCGAAAACA TCTGA
 
Protein sequence
MEEFVGGLWD KLITRTAHRG FPKARVTLRE IDPIAPIFFR ALGGDPGLSV RAGTATAHGA 
RRSWMERVAG VGEKIELAWS DDTTLHLPAE LDVFPERAQN RELYLWLLAL AAHDVAPQAP
WIVRNQAATR AALAALPGLA PRYRRLVGDL LNLRPKPERL RDQEAAAEAA IRAALTEPGS
VTDFMAGKHP PMPVPLWLHP TPPVNTGDAR QAGSAKSPQP GSAKSQADEE ARKRRAERVE
MPEAKSPFML LFRAESLFSW AEFVKVDRPL DEDENEHAAK AANDLDILSV ADDDKSTAAS
RVRFDLDLPA EADDDLVLAD GILLPEWNYR KQRLQPDHCR LQMMVARDAE PCPLPQTLRA
PAKRLRQQFQ ALTTQRARLR AQLSGSDLDI DACVRFAADK IDGVRSSEPG LYVDSRKQQR
DLSCLLLADL SLSTDAWVNN SARVIEVIRD SLLLFGEALA ATGDRFALYG FSSVRRDNVR
FHLLKGFDER YDDGIRGRLA TLKPGYYTRM GAAIRHAAAI LATRKSSRRL LLILTDGKPN
DLDKYEGRYG IEDTRMAILE ARRQGLTPFC VTIDEAAGDY LPHLFGASGF VVVHDAAMLP
QVLPSLYARL TENI