Gene Tbd_0461 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTbd_0461 
Symbol 
ID3673094 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThiobacillus denitrificans ATCC 25259 
KingdomBacteria 
Replicon accessionNC_007404 
Strand
Start bp484682 
End bp485416 
Gene Length735 bp 
Protein Length244 aa 
Translation table11 
GC content69% 
IMG OID637709132 
Productputative transcriptional acitvator, Baf 
Protein accessionYP_314219 
Protein GI74316479 
COG category[K] Transcription 
COG ID[COG1521] Putative transcriptional regulator, homolog of Bvg accessory factor 
TIGRFAM ID[TIGR00671] pantothenate kinase, type III 


Plasmid Coverage information

Num covering plasmid clones38 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCGGAT GCCGTATCTT GCTCGACGCC GGTAACTCCA GCCTCAAGTG GGCCGTCGTC 
GAGGACGGAA CATGGCTCGC CCGCGGCCGC AGCGACTACA GTGACCTGTC GGCCGTAGAG
GCGGAATTGG ACGCGGGGTC GGAATGCTTC ATCGCGAGCG TGGCAAGCCG GGTCTACGAG
GAGAAGCTGG CGGCCCTGCT GACGGCGGCC GGCTGTTCGG CCGTCTGGCT CAAAAGCGAA
GCGGCTTTCG ACGACGTGAC GAACGACTAT CGTGATCCGA CACAGCTCGG CGTGGATCGC
TGGATGGGTC TGGTCGCGGC GCGCGCGCGC CGACGCGCCC CGACGCTCGT CGTGTCGGCC
GGAACGGCGA TGACGGTCGA CGCCTTGTCC GGCGACGGCA GCTTCCTCGG TGGACTCATC
GTGCCGGGGG TGGCGTTGAT GCAGCGGTCC CTGCAACAGG GGACGGCGGG CGGCGCAGCC
GCCGGTGGCG CGTGGCAGGC GTTTCCCCGT TGTACTGCGG ATGCGGCATA TAGCGGAATC
ATCGCCGCGC TATGCGGGGC CGTGGAGGGC CAGCACGTGC GGCTGGCGGC GCATGAGGGC
ATCTCGCCGG CCTGCCTGAT CACCGGCGGC GGGGCCGAGA CACTGCTTCC GCATTTGGGG
GTCGACGCCG AGCACGTGCC CACGCTCGTG CTCGAAGGTA TCGAGCGCGT CGCGCGCGCA
GGGGGGCGAG GATGA
 
Protein sequence
MSGCRILLDA GNSSLKWAVV EDGTWLARGR SDYSDLSAVE AELDAGSECF IASVASRVYE 
EKLAALLTAA GCSAVWLKSE AAFDDVTNDY RDPTQLGVDR WMGLVAARAR RRAPTLVVSA
GTAMTVDALS GDGSFLGGLI VPGVALMQRS LQQGTAGGAA AGGAWQAFPR CTADAAYSGI
IAALCGAVEG QHVRLAAHEG ISPACLITGG GAETLLPHLG VDAEHVPTLV LEGIERVARA
GGRG