Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Tbd_0356 |
Symbol | |
ID | 3672142 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Thiobacillus denitrificans ATCC 25259 |
Kingdom | Bacteria |
Replicon accession | NC_007404 |
Strand | + |
Start bp | 385696 |
End bp | 387663 |
Gene Length | 1968 bp |
Protein Length | 655 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 637709017 |
Product | 5'-nucleotidase |
Protein accession | YP_314114 |
Protein GI | 74316374 |
COG category | [F] Nucleotide transport and metabolism |
COG ID | [COG0737] 5'-nucleotidase/2',3'-cyclic phosphodiesterase and related esterases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 25 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 9 |
Fosmid unclonability p-value | 0.0863234 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGATGCATC GGCTCCACCC CCTCGCCGTC GGCGTGCTGT TGTCGCTTTC CGTCCAAGCC CAGGCCGCCT GTCTGGAACC CAGCGTTGTG ATCGGCACCG TCGATTCCGC CGTGGCCAAT AAGGAAATCG GCGCGGCCTG CATGAACGAC CTCATCATCG ATTCCGCTTC CGAAGGCGCC AACTGGGGCA GCCATGGCGA ATTCGTGAGC GCGGTGTCGC GGCTCACGCA GGACTGGCTG AAGGCGGAGT CCATCAGCGC CACCGAGCGC AGCCGGATCG TGAGCGCCGC GGCCCGCTCG GACGTCGGTT CGACGCTGCT CGTCAAGATT GCGGCGATCA ACGATTTCCA TGGCCAGCTG TTCAGCCCGG GAAGTTTTGC CGGCAAGCCG GTGGGCGGCA TCGACGCCCT GGCGGCTTAT ATCGACGCCA TCCGCGCCAA ATCGCCCAAC CACGTAACGG TTTCCGCGGG CGACCTGATC GGCGCGACGC CGCTGGTTTC GGCGCTGTTC CACGACGAGC CGACGATCGA GGGCATGAAC ATCCTGGGCC TGGACTTCAA CGCCGTCGGC AACCACGAGT TCGACGAGGG GCGCGACGAG CTGCTGCGCA TGCAGAACGG CGGCTGCCAT CCGACCGACC CCAACTCGTG CCAAGGCGAT GCAGTCGGCA CGCCGGTCCC GTTCGAGGGC GCCCGCTTCA AATTCCTGGC GGCCAACGTC ACCGAAAAGA CCGACGGCAA GACGCTGTTC CCTGCGTACG CGATCCGAAA TTTCAAGGGC AACAAGGTCG CCTTCATCGG CATGACGCTC GAGGACACGC CCAGCATCGT CACGCCCAGC GGCATTTCGA CGCTGGATTT CCACGACGAG GCCGACACGG TCAACGCGCT GATCCCCGAA CTGAAGGCGC AGGGCGTGGA AAGCATCGTG GTGCTAGTCC ACGAAGGCGG CGTGGATACC ACGACGGCGA ACATCAACGA CTGCAGCAAC GTCTCTGGCG CGATCCTCGG TATCGTCCAG CGTCTGGACG ACGCGGTGGA TCTGGTCGTC AGCGGCCATA CGCACCAGGC GTATCGGTGC AGCCTGTCCA ACCGCGCAGG CCGCACTATC CCGGTGACGA GCACCAACGC CCAGGGGCGC TCCGTCACCG AGATCGATCT GGTCATCGAC ACCATGACGC GCGACGTGGC CAGCATTGCC GTCGACAACG TGGTGGTCGA CCGCAGCAAT GCCGCCGTGC CTCCCATGGC GGCGCTGACC GCGCTGGCCA ACGGCTACAA TGCGTTGGCC GCGCCGCTGG CCAATACGCC CCTTGGCGGC ATCACGGCCG CGATCACCCG CAGCGCCAAT GCGGCGGGCG AGTCCGCGCT GGGCGACGTC ATCGCCGACG CGCAGCTCGA AGCGACTGCC GCTCCGGAAC TGGGCGGTGC GGTGATTGCC CTGATGAACC CGGGCGGCAT ACGCGCCGAC TTCACCTACC CGAGCAGCGA CGCGCTGGAA GGCGACGGCG TCGTGACTTA TGGTGAAGCG TTCGCCGTGC AGCCTTTCGG CAACTCACTG GTGACCAAAA CCTTCACGGG CCAGCAGATT TATGATCTGC TGGAGCAGCA GTGGGGCGCG TTCCAACCGT TCGCGCGCAT CCTCCAGGTG TCGGAAGGCT TTAGCTACCA GCACACGTTC GACACCGCGG CGGCGAACTT CGCAGCACAA AAAGGCGCCC ACTACGTCTG CGACGGCAGC GTCAAGCTCC ATGGCGTGGC GATCGACAAG CTCGCCAGCT ACCGCGTGAC CATGAACTCC TTCCTCGCCT CGGGCGGCGA CAATTTCACC GTGTTCACTC AGGGGACGGG CCAACTCGGT GGCGCCCTTG ACCTCGACGC GATGCAGCAG TATTTCAAGT CGCACGATCC CGTCGCACCC AGCGCGCAGG ACCGCGTCGT CAAGGTGAGT GTCTGCCCGG CGCCATGA
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Protein sequence | MMHRLHPLAV GVLLSLSVQA QAACLEPSVV IGTVDSAVAN KEIGAACMND LIIDSASEGA NWGSHGEFVS AVSRLTQDWL KAESISATER SRIVSAAARS DVGSTLLVKI AAINDFHGQL FSPGSFAGKP VGGIDALAAY IDAIRAKSPN HVTVSAGDLI GATPLVSALF HDEPTIEGMN ILGLDFNAVG NHEFDEGRDE LLRMQNGGCH PTDPNSCQGD AVGTPVPFEG ARFKFLAANV TEKTDGKTLF PAYAIRNFKG NKVAFIGMTL EDTPSIVTPS GISTLDFHDE ADTVNALIPE LKAQGVESIV VLVHEGGVDT TTANINDCSN VSGAILGIVQ RLDDAVDLVV SGHTHQAYRC SLSNRAGRTI PVTSTNAQGR SVTEIDLVID TMTRDVASIA VDNVVVDRSN AAVPPMAALT ALANGYNALA APLANTPLGG ITAAITRSAN AAGESALGDV IADAQLEATA APELGGAVIA LMNPGGIRAD FTYPSSDALE GDGVVTYGEA FAVQPFGNSL VTKTFTGQQI YDLLEQQWGA FQPFARILQV SEGFSYQHTF DTAAANFAAQ KGAHYVCDGS VKLHGVAIDK LASYRVTMNS FLASGGDNFT VFTQGTGQLG GALDLDAMQQ YFKSHDPVAP SAQDRVVKVS VCPAP
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