Gene Tbd_0330 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTbd_0330 
Symbol 
ID3672116 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThiobacillus denitrificans ATCC 25259 
KingdomBacteria 
Replicon accessionNC_007404 
Strand
Start bp351710 
End bp352576 
Gene Length867 bp 
Protein Length288 aa 
Translation table11 
GC content62% 
IMG OID637708991 
Productcytochrome c oxidase, subunit III 
Protein accessionYP_314088 
Protein GI74316348 
COG category[C] Energy production and conversion 
COG ID[COG1845] Heme/copper-type cytochrome/quinol oxidase, subunit 3 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value0.625024 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0114384 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGTCTGG CACAAACTGA CAAGTATTAT CTGCCGCAGC CTTCGATCTG GCCGTTCGTC 
GGCTCGGTCG CGCTGCTGTT GATGGCGGTC GGCGGCACGA TGACGATGCG CGAAATCGAC
AACGGCGGAT GGGTGCTGCT CGCCGGGCTC GCCGTCCTGT TCTACATGAT GTTCGGCTGG
TTCGGCGAGG TGATTCGCGA CAGCGAGGCG GGACGCTACA ACAGGCAGGT CGATTCCTCC
TACCGCTGGT CGATGAGCTG GTTCATTTTT TCCGAAGTGA TGTTCTTCGC GGCCTTTTTC
GGTGCGCTGT TCTATACCCG TGTGCTCTCG GTGCCGTGGC TCGCCGACGC CGAGACCGGC
AGCTTGCTAT GGAAGGGCTT CGAGGCGACC TGGCCGACCG CCGGGCCCGG GCTTGCCCAG
GACGGATTCG CCTTCACGCC CATGGGCGCA TGGGGGATTC CCGCGATCAA TACGCTGCTG
CTACTGAGCT CCGGCGTGAC GGTGACCTGG GCGCACTGGG GCCTGAAGAA GGGCAATCGC
ACCCAACTCA TCCTCGGCCT CGCGATGACG GTTGCGCTCG GCGCCACGTT CCTCGCGTTG
CAGGTGTACG AGTACCACCA CGCCTATACC GAGCTGGGCC TGACGCTGGG GGCCGGCGTT
TACGGCGCGA CCTTCTTCAT GCTCACGGGC TTCCACGGAT TTCACGTGCT GGTCGGGACG
ACGATGCTGA TCGTGATGCT GTTGCGTTCG ATCGCTGGCC ACTTCACCGC CGAACACCAT
TTCGCGTTCG AGGCCGTGTC CTGGTATTGG CACTTCGTCG ACGTCGTGTG GGTGCTGCTG
TTCATTCTGG TGTACTGGCT GATCTAG
 
Protein sequence
MSLAQTDKYY LPQPSIWPFV GSVALLLMAV GGTMTMREID NGGWVLLAGL AVLFYMMFGW 
FGEVIRDSEA GRYNRQVDSS YRWSMSWFIF SEVMFFAAFF GALFYTRVLS VPWLADAETG
SLLWKGFEAT WPTAGPGLAQ DGFAFTPMGA WGIPAINTLL LLSSGVTVTW AHWGLKKGNR
TQLILGLAMT VALGATFLAL QVYEYHHAYT ELGLTLGAGV YGATFFMLTG FHGFHVLVGT
TMLIVMLLRS IAGHFTAEHH FAFEAVSWYW HFVDVVWVLL FILVYWLI