Gene Tbd_0308 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTbd_0308 
Symbol 
ID3672094 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThiobacillus denitrificans ATCC 25259 
KingdomBacteria 
Replicon accessionNC_007404 
Strand
Start bp331980 
End bp332909 
Gene Length930 bp 
Protein Length309 aa 
Translation table11 
GC content69% 
IMG OID637708969 
Productglycosyltransferase 
Protein accessionYP_314066 
Protein GI74316326 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0463] Glycosyltransferases involved in cell wall biogenesis 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones34 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value0.550387 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTTCGCCG TCACCGTCGC CTTCTGCACC TACCGCCGAC CCGAGCGCCT CGAAAAACTG 
GTCGCGGCGC TGCGTTCGCA GACCTGCCCG CTGCCTTTCG AAATCCTCGC CGTCAACAAC
AACAGCCCCG ACGACACGCT CGCCGTCCTA GAGCGCCTGC GTGCGGCCCC GGGTGCCCCG
CTCCACGTCG TCACCGAAAC CGCGCCCGGC ATCGTCCCGG CGCGCAACCG CGCGCTTGCC
GAAACACGCG AGCGCGACAT CCTGGTTTTC ATCGACGACG ACGAACTGCC CCAGCCCGGC
TTTCTCGCCG CGGCGTGCGC GGCGATCGTC GACGAAGGCG CGCACTGCGT CGGCGGGCGC
ATCGACATCG ACTTCAGTCC CCACCGGCGT CCGCCCTGGC TCGACGACGA GGTCGCGGGG
TTTCTCGGCC GCCTCGACCA TGGCCCGGCC GACTTCTGGG TCACCGACAG CGCGACGCCG
CTGTGGAGCG GCAACATCGC ATACGCGATG GCGTTCTTTC GCGCCCACCC CGAGCTCAAC
TTCGACCCGC GCTACAACCG CGAAGGCACC GACGTCGGCG GCGGCGAAGA CGCGATGATG
CTGCGCGCGC TGCTCGCCCT CAGCGCAAAA ATCCGCTACC GCCCGGACAT GGCGGTATGG
CACGCGGTCG ACCCGTGGAA GCTCAAGCGC CGTTATTTCG TGAAGCTGCA TTACCGCGCG
GGCCTGCGCC ACGGCCAGTT CCGCCTGCCG GATTTTCCGC GCACCGTGCT TGGCGTGCCG
CCTTTTCTGC TCGGCCAGTT CGTCAGCCAT TGCCTCAAAA CGCTCTGGCA CCTGTTGCCG
GGCGCCCCCA ACCCGGTCCG GCAGGCGATG AACGCGTCGC ACGCCTTCGG CCTGATCGTC
GGCTACCAGC GCCGCACCGA GCCCTCATGA
 
Protein sequence
MFAVTVAFCT YRRPERLEKL VAALRSQTCP LPFEILAVNN NSPDDTLAVL ERLRAAPGAP 
LHVVTETAPG IVPARNRALA ETRERDILVF IDDDELPQPG FLAAACAAIV DEGAHCVGGR
IDIDFSPHRR PPWLDDEVAG FLGRLDHGPA DFWVTDSATP LWSGNIAYAM AFFRAHPELN
FDPRYNREGT DVGGGEDAMM LRALLALSAK IRYRPDMAVW HAVDPWKLKR RYFVKLHYRA
GLRHGQFRLP DFPRTVLGVP PFLLGQFVSH CLKTLWHLLP GAPNPVRQAM NASHAFGLIV
GYQRRTEPS