| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tbd_0298 |
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| Symbol | |
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| ID | 3672084 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thiobacillus denitrificans ATCC 25259 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007404 |
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| Strand | - |
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| Start bp | 319069 |
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| End bp | 320889 |
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| Gene Length | 1821 bp |
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| Protein Length | 606 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 637708959 |
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| Product | amidotransferase |
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| Protein accession | YP_314056 |
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| Protein GI | 74316316 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0367] Asparagine synthase (glutamine-hydrolyzing) |
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| TIGRFAM ID | [TIGR01536] asparagine synthase (glutamine-hydrolyzing) |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.160301 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGATGGCA TTTTTGGCTG GCTAGGCGCC GACGGCGCGC ATCAGGACCT GATCCGGCAG
ATCGCGGGCG GCGATGCCGA CGCGGCCGGC CTGCGTCGAT ACCACAGCGC GGAACTCGGA
CTGGCGGCGC AGTCGCGCTT CGGCAAGGCC GACATCGCGG TCGAGGATGG ACACGCGGTG
GCGCTCATGG GACGCCCGCG CTTCGTCGAC GCGGACCTCG CGCGCGTCGC CCGCGAAACC
GGCCCGGCCG CCGCGGTCGC GCAGGGCTGG CGCAGCCACG GCGCCGGCCT GCCGGCGCGC
ATGCAGGGGA ATTTCGCCTT CGCCGTGCTC GAGCCGCAGG CGAAGAAGGC CTGCCTCGTG
CTCGACCGCA TGGGTGCGGA ACGCCTGGGC TACGCGCATC GCGGCGACCA GCTCGTTTTC
GGCAGCAGCG TCCAGCACGT CGCCGCCCAC CCTGCCGTCG GCCGCAACAT CGAGCCGCAG
GCGATCTACG ACTACCTGTA CTTCCACAAC ATCCCCGCGC CGCGCAGCCT CTACCGCGGC
GTGCACAAGC TGCTGCCCGG ACAGATCGTC ACGCTCGAGA ACGGACGGCT CGCGACGCGC
TTCTACTGGC ACGCCGATTA CACGCCGCAC GACGCGGGCT TCGACGTGCA GCGCGACGCC
TTCCGTCGCG TCCTCGACGC GGCCGTGCGC GACGCCGACG GGCCGGCGAC CGCAGCGTTT
CTCTCGGGCG GCACCGACAG TTCGACGGTC GTCGGCGCGC TGACGGCGGC GCGCGGCGGG
CCCGTCGATA CCTTCTCGAT CGGTTTCGAC GCCGAGGGCT TCGACGAAAT GGCGTATGCC
CGCTGTGCCG CCGCGCGGTA CGACAGCCGG CGCCACGAGT ACTACCTCAA GCCGGCCGAC
ATCGTCACCG CGATTCCGCT GATCGCGCGC GAATACGACG AGCCCTTCGG CAACGACTCC
GCGGTCCCGA CCTATTTCTG CGCCCGCGCC GCGCGCGAAG CGGGCTTCGG ACGCATGCTC
GCCGGCGACG GCGGCGACGA GATATTCGGC GGCAACGCGC GCTACGCGAA GCAGAAGCTG
TTCGAAAATT ATTTCCGCGT GCCGGCGCCG CTGCGCCACG GCCTGATCGA GCCGCTGGCG
ACGCTTCCGG GCGTGTCCGA TCACTTTCCG CTGTCCAAGC TCAAGAGCTA CGTCCGCCAG
GCGAACATGG GGCTGCCGCT GCGCATGGAA AGCTACAACT TCCTGCACCG CACGCCGCTC
GACCAGATCT TCGCCGCCGA TTTCGTCGCC GCGGTCGATC CTTCGGCGGC GGATGCAGCG
CTCACCGAGG TCTACGCGCG CACGGCGTCG GACCACTACA TCAACCGCAT GATGCATCTC
GACCTCAAGT TCACGCTCGC CGACAACGAC CTGCGCAAGG TCGGCACGAT GACCGAGGCG
GCGGGGGTCG AGGTCGCCTA CCCGCTGCTC GACGACCGCC TGGTCGCGCT CGCGAACCAT
CTTCCGGTCG ACTGGAAGGT ACGCGGACAA GCGCTGCGCT GGTTCTTCAA GGAAGCCCTG
CGCGACCTGC TGCCGGAAGA GATCATCAAC AAGCGCAAGC ACGGCTTCGG CCTGCCGTTC
GGCGTATGGA GCACACAACA CGCGCCGCTC GCCGAACTCG TGCACGACAG TCTCTCGGAC
TTCAAGCGCC GTGGCTGGGT CCAGCCGGGC TACCTCGACC ACATGCTCGC GATGCAGCGT
GGCCCGCACG CGAGCTACTA CGGCGTCATG ATCTGGGTCG TGATGATGCT CGAGCGCTGG
CTGCAGGCGA ACGCGCACTA G
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| Protein sequence | MDGIFGWLGA DGAHQDLIRQ IAGGDADAAG LRRYHSAELG LAAQSRFGKA DIAVEDGHAV
ALMGRPRFVD ADLARVARET GPAAAVAQGW RSHGAGLPAR MQGNFAFAVL EPQAKKACLV
LDRMGAERLG YAHRGDQLVF GSSVQHVAAH PAVGRNIEPQ AIYDYLYFHN IPAPRSLYRG
VHKLLPGQIV TLENGRLATR FYWHADYTPH DAGFDVQRDA FRRVLDAAVR DADGPATAAF
LSGGTDSSTV VGALTAARGG PVDTFSIGFD AEGFDEMAYA RCAAARYDSR RHEYYLKPAD
IVTAIPLIAR EYDEPFGNDS AVPTYFCARA AREAGFGRML AGDGGDEIFG GNARYAKQKL
FENYFRVPAP LRHGLIEPLA TLPGVSDHFP LSKLKSYVRQ ANMGLPLRME SYNFLHRTPL
DQIFAADFVA AVDPSAADAA LTEVYARTAS DHYINRMMHL DLKFTLADND LRKVGTMTEA
AGVEVAYPLL DDRLVALANH LPVDWKVRGQ ALRWFFKEAL RDLLPEEIIN KRKHGFGLPF
GVWSTQHAPL AELVHDSLSD FKRRGWVQPG YLDHMLAMQR GPHASYYGVM IWVVMMLERW
LQANAH
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