| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tbd_0276 |
|---|
| Symbol | |
|---|
| ID | 3671418 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Thiobacillus denitrificans ATCC 25259 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007404 |
|---|
| Strand | - |
|---|
| Start bp | 294998 |
|---|
| End bp | 295783 |
|---|
| Gene Length | 786 bp |
|---|
| Protein Length | 261 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 65% |
|---|
| IMG OID | 637708937 |
|---|
| Product | ABC-2 type transporter, NodJ |
|---|
| Protein accession | YP_314034 |
|---|
| Protein GI | 74316294 |
|---|
| COG category | [V] Defense mechanisms |
|---|
| COG ID | [COG0842] ABC-type multidrug transport system, permease component |
|---|
| TIGRFAM ID | [TIGR01291] ABC-2 type transporter, NodJ family |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 22 |
|---|
| Plasmid unclonability p-value | 0.664635 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 15 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGACTAGTC ATCTGCGCCT TCCGCGTCTG TCGTGGCGCT TCATTCCGGT ATGGCAGCGC
AATTACCTGG TCTGGCGAAA GCTCGCGATT CCGTCGATCC TCGGCAATCT CGCCGACCCG
ATGCTCTACA TGCTCGGCCT CGGCTACGGA CTCGGCCGCC TGCTACCCGA CGTCGGCGGC
ATGCCCTACC TGACCTTCCT CGCCGCCGGC ACGGTCGCCT ATAGCACGAT GAACGCGGCG
ACCTTCGAGG TCTTGTACTC GGGCTTTTCG CGCATGCACG TGCAACGCAC CTGGGACGCG
ATCATGAATG CGCCGCTCAC GCTCGACGAC GTGATGCTCG GCGAGCTGAG CTGGGCGGTG
GCAAAAAGTC TGCTGTCCGG CCTCGCGATC CTCGCGGTGA TCTGGGGCCT GGGCCTTTAC
GGCCACTTCT GGATGACGCT ATGGATCATC CCCGTGGTCG CGCTGGTCGG CTTCTGCTTC
GGCGGCATGG GGCTGGTCAT GAACGCGGTC TCGCCGAGCT ACGATTTCTT CCTTTATTAC
TTCACGCTCG TGATCACGCC GATGGTGCTG CTGTGCGGCG TCTTCTTCCC CGTCTCGCAA
CTGCCACCGG CGCTGCAGGC GGTGTCGGCT TGGCTGCCGC TGACCCATGC GATCGACCTC
GCGCGCCCGC TCGTGGCCGG CAACCGGCCG GACGACATCG TCCTGCATAC GCTCGCGCTG
CTGGGCTACG GCACGGTCGG CTACGTCGTC GCGCTCGCGC TGACACGCCG GCGCCTGCTC
AAATAA
|
|---|
| Protein sequence | MTSHLRLPRL SWRFIPVWQR NYLVWRKLAI PSILGNLADP MLYMLGLGYG LGRLLPDVGG
MPYLTFLAAG TVAYSTMNAA TFEVLYSGFS RMHVQRTWDA IMNAPLTLDD VMLGELSWAV
AKSLLSGLAI LAVIWGLGLY GHFWMTLWII PVVALVGFCF GGMGLVMNAV SPSYDFFLYY
FTLVITPMVL LCGVFFPVSQ LPPALQAVSA WLPLTHAIDL ARPLVAGNRP DDIVLHTLAL
LGYGTVGYVV ALALTRRRLL K
|
|---|
| |