| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tbd_0219 |
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| Symbol | |
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| ID | 3671361 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thiobacillus denitrificans ATCC 25259 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007404 |
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| Strand | - |
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| Start bp | 239408 |
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| End bp | 243187 |
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| Gene Length | 3780 bp |
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| Protein Length | 1259 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 637708880 |
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| Product | (S)-2-hydroxy-acid oxidase |
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| Protein accession | YP_313977 |
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| Protein GI | 74316237 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG0277] FAD/FMN-containing dehydrogenases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.524228 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 9 |
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| Fosmid unclonability p-value | 0.117138 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAATTCCC GCCTCCGCGA AATCCCGTAC AACTACACCT CGTTTTCCGA CCGCGAGATC
GTCATCCGCC TGCTCGGCGC CGACGCGTGG AACGGGCTGA ACACGCTGCG CAGCGAGCGC
CGGACCGGAC GCTCGGCACG CATGCTGTTC GAGGTGCTCG GCGACATCTG GGTCGTGCGG
CGCAATCCCT ATCTCGAAGA CGACCTGCTC GCCAATCCGA AACGCCGGCA GATGCTGATC
GACGCGCTGC GGCACCGGCT GCACGAGATC GAGCTGCGGC GTCATGGCAA CGAACTGGTC
GGCCAACTGC TCGCGGCTGC CGAACGCGCG GTGCGGGAAT TCGCCGAGTG GTTCGACGAC
ACGGCCGACC TGCGCGCCCG CACGCTGCGC CGCCTTGTCG GCGTGACGCG CCGCGACAAT
ATTTCCTTCG ACGGTCTCGC GCGCGTCTCG CACGTCACCG ACGCGACCGA CTGGCGCGTG
GAATACCCCT TCGTCGTACT CACCCCCGAC ACCGAGGCCG AAATCGCCGG CATCGTCGCC
GGGCTGATCG AGCTCGGGCT GACCGTGATC CCGCGCGGCG GCGGCACGGG CTATACCGGG
GGCGCGGTGC CGCTCACGGA CAAGGCCGCG GTCGTCAACA CCGAAAAGCT CGAAGTGATG
AGCGGCGTCG AGATGCAGCA TCTGCCCGGC TGCGAATTCG GCGTGCCGAC GATCCTTTGC
GGCGCGGGCG TCGTGACCAA GCGCGTGATG GAAGCCGCCG ACGCGGCTGG CCTCGTGTTT
GCCGTCGATC CGACCTCGGC CGACGCGTCG ACCATCGGCG GCAACGTGTC GATGAACGCG
GGCGGCAAGA AAGCCGTGCT GTGGGGCACG GCGCTCGACA ACCTGGTGTC CTGGCGCATG
GTCACGCCCG AGGCGGACTG GCTCGAAGTG ACACGGCTCA ACCATAACCG CGGCAAGATC
CACGACGCCC CGGCGGCGAC CTTCGAGGTC CGCCGCTATG CGGCCGACGG GGCGACGCCC
AAGGGCTCGC CCGAAATCCT CACGATTCCC GGCAGCCGCT TCCGCAAGGC GGGGCTCGGC
AAGGACGTCA CCGACAAGTT CCTCGCCGGA CTGCCCGGCA TCCAGAAGGA AGGCTGTGAC
GGGCTCATCA CCTCGGCGCG CTTCATCCTG CACAAGATGC CGGCGCACAC CCGGACGCTC
TGCCTGGAAT TCTTTGCCAA CGCGCGCGAG GCGACGCCCG CGATCGTCGA AATCAAGGAT
TACTGCGACG CCCATCCCGA CGTCCTGCTC GCCGGCCTCG AGCACCTCGA TGCCCGCTAC
CTCAAGGCCG TCGGCTATGC GACCAAGTCG CCGCGCGCCG CGCGGCCGAA CATGGTGCTG
CTGATCGACG TCGTCTCCGA CGACGAAACC GCCGTCGGCG AAGCGGCGTC GCGGATCGTG
CGAATCGCCA ATGCGCGCGG CGGCGAAGGC TTCATCGCCG TGTCGGCCGA GACGCGCAAA
AAATTCTGGC TCGACCGCGC CCGCACCGCC GCGATCGCGG CGCACACCAA CGCGTTCAAG
ATCAACGAGG ATGTCGTCAT CCCGCTGCCG CGGCTGGGCG ACTACACCGA CGGTATCGAG
CGCATCAACA TTGAGCTGTC GATCCGCAAT AAGCTCGCGC TGATCGACGC CCTCGCCGAA
TTCTTCGCCG CCCCGCTCCC CCTGCATGAG GACGAAGACA CGGTCGCCGA CCCGGTACAG
ACAGCCGAAA AGCAGCGCCA GGCACAGGCA CTGCTCGCCG CCGTCCGCGA GCGCTGGGCG
GGCTACCTCG CCGATCTCGA CGCGCCCTAC GAGGCCGGCA CCGTGTTCAC CGCGCTGCGC
GACAAGGAAG TTCGCGTGTC GTGGAAACGC GAAGTGCGGC GCGAATTGCA CCAGCTCTTC
ATCGGCCGCG AATACACGCC GGTGCTGCAA ACCTGCGACA GCATCCACAA GGACATATTG
AAGAGCCGCG TTTTCGTCGC GCTGCACATG CACGCCGGCG ACGGCAACGT GCACACCAAC
ATCCCGGTCA ACTCCGACGA TTACGCGATG CTCGCGACCG CCAACGCAGC AGTGGCCCGC
ATCATGGCGC TCGCGACCGA ACTCGGCGGC GTGATCTCGG GCGAGCACGG CATCGGCCTC
ACCAAGCTCG AGTTCCTCGA CGACGCGACG ATCGCGACCT TCGTCGACTA CAAGAACAAG
GTCGATCCGG CCGGCCGCTT CAACAAGGGC AAGCTCATGC CCGGGGCGGA CCTGCGCAAC
GCCTACACGC CCTCGTTCAA CCTGCTCGAG GCCGAATCGA TCATCCTCGA GGCCTCGGAG
ACCGGCGCGA TCGCCGATTC GATCAAGGAC TGCCTGCGCT GCGGCAAGTG CAAGCCGGTC
TGCAACACCC ACATTCCGCG CGCCAACCTG CTTTATTCGC CGCGCAACAA GATCCTCGCC
ACCTCGCTCC TGATCGAGGC CTTCCTCTAC GAGGAGCAGA CTCGGCGCGG CGTTTCGCTG
AAGCACTTCG ACGAGTTCGG CGACGTCGCC GACCACTGCA CGATCTGCCA CAAGTGCAAG
TACCCCTGCC CGGTCGACAT CGACTTCGGC GACGTCTCGA TCGCGATGCG CAACCTGCTG
CGCCGCCAGG GCAAGAAGAA ATTCAACCCC GGCACCTGGG CGTCGATGGC CTTCCTCAAC
GCGACCGACC CGGCGACGAT CAAGGCGCTC AGAAAGCCGC TGATCGAGTG GGGCTACAGC
AGCCAGCGCG TCGGCCACAA GCTGTTCAAG CGCATGGGAC TGATCCAGGG CCAGACCCGC
CATCCGCCGG CGACCACCGG TCGCTCCCAG GCGGTTGCGC AGGTCATCCA TCTCGTCAAC
AAGCCGATGC CGGGCGGCCT GCCGAAGAAG ACCTCGCGCG CGCTGCTGGG ACTCGAGGAC
CCCTCGATCG TCCCCGTCCT GCGCAACCCG GCCAAGCTCT CCGACGAGTC CGACGCAGTC
TTCTACTTCC CGGGATGCGG CTCCGAGCGC CTCTTCTCGC AAGTCGGGCT CGCGACGCAG
GCGATGCTGT TCGAGCTCGG CGCGCAGACC GTGCTGCCGC CCGGTTACCT CTGCTGCGGC
TACCCGCAGA TCGCGGGCGG CCAGTCAGAC AAGGGCGACG CGATCACCGC GCAGAACCGC
GTGCTGTTCC ACCGCGTCGC CAATACGCTC AATTACCTCG ACATCAAGAC CGTGCTCGTG
TCCTGCGGCA CCTGCATGGA TCAGCTGCTG AAATACGAAT TCGAGAAAAT CTTCCCCGGC
TGCCGCCTGC TCGACATCCA CGAATACCTG ATGGAAAAAG GCGTGAAGCT CGAAGGCGTC
GCCGGCGAGA AATATCTCTA CCACGACCCC TGCCATACGC CGATGAAGAC CCACGCGCCG
ATGAAAGTCG CCAACGCGCT GCTCGGCGAC GGCGTCGTCT TGTCCGACCG CTGCTGCGGC
GAGTCCGGCA CGCTCGCCGT CAGCCGCCCC GACATCTCGA CCCAGATCCG CTTCCGCAAG
GAAGAGGAAA TCCGCGCCGG GGTCGCGGCG ATCAAAGCGG GCCAGCGCAC CACGACGCCG
GTAAAACTTC TCACCAGCTG CCCGTCGTGC CTGCAGGGAT TGTCGCGCTA CACCGAAGAC
GCCGACGTCG AACCCGACTA CATCGTGATC GAACTCGCGA AGAGGCTGCT CGGCGAGAAC
TGGATGACGA ACTACCTCGC CCGCGTCGGC AACGGCGGGA TCGAGCGGGT GCTGCTGTAA
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| Protein sequence | MNSRLREIPY NYTSFSDREI VIRLLGADAW NGLNTLRSER RTGRSARMLF EVLGDIWVVR
RNPYLEDDLL ANPKRRQMLI DALRHRLHEI ELRRHGNELV GQLLAAAERA VREFAEWFDD
TADLRARTLR RLVGVTRRDN ISFDGLARVS HVTDATDWRV EYPFVVLTPD TEAEIAGIVA
GLIELGLTVI PRGGGTGYTG GAVPLTDKAA VVNTEKLEVM SGVEMQHLPG CEFGVPTILC
GAGVVTKRVM EAADAAGLVF AVDPTSADAS TIGGNVSMNA GGKKAVLWGT ALDNLVSWRM
VTPEADWLEV TRLNHNRGKI HDAPAATFEV RRYAADGATP KGSPEILTIP GSRFRKAGLG
KDVTDKFLAG LPGIQKEGCD GLITSARFIL HKMPAHTRTL CLEFFANARE ATPAIVEIKD
YCDAHPDVLL AGLEHLDARY LKAVGYATKS PRAARPNMVL LIDVVSDDET AVGEAASRIV
RIANARGGEG FIAVSAETRK KFWLDRARTA AIAAHTNAFK INEDVVIPLP RLGDYTDGIE
RINIELSIRN KLALIDALAE FFAAPLPLHE DEDTVADPVQ TAEKQRQAQA LLAAVRERWA
GYLADLDAPY EAGTVFTALR DKEVRVSWKR EVRRELHQLF IGREYTPVLQ TCDSIHKDIL
KSRVFVALHM HAGDGNVHTN IPVNSDDYAM LATANAAVAR IMALATELGG VISGEHGIGL
TKLEFLDDAT IATFVDYKNK VDPAGRFNKG KLMPGADLRN AYTPSFNLLE AESIILEASE
TGAIADSIKD CLRCGKCKPV CNTHIPRANL LYSPRNKILA TSLLIEAFLY EEQTRRGVSL
KHFDEFGDVA DHCTICHKCK YPCPVDIDFG DVSIAMRNLL RRQGKKKFNP GTWASMAFLN
ATDPATIKAL RKPLIEWGYS SQRVGHKLFK RMGLIQGQTR HPPATTGRSQ AVAQVIHLVN
KPMPGGLPKK TSRALLGLED PSIVPVLRNP AKLSDESDAV FYFPGCGSER LFSQVGLATQ
AMLFELGAQT VLPPGYLCCG YPQIAGGQSD KGDAITAQNR VLFHRVANTL NYLDIKTVLV
SCGTCMDQLL KYEFEKIFPG CRLLDIHEYL MEKGVKLEGV AGEKYLYHDP CHTPMKTHAP
MKVANALLGD GVVLSDRCCG ESGTLAVSRP DISTQIRFRK EEEIRAGVAA IKAGQRTTTP
VKLLTSCPSC LQGLSRYTED ADVEPDYIVI ELAKRLLGEN WMTNYLARVG NGGIERVLL
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