Gene Tbd_0113 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTbd_0113 
Symbol 
ID3673892 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThiobacillus denitrificans ATCC 25259 
KingdomBacteria 
Replicon accessionNC_007404 
Strand
Start bp118991 
End bp120724 
Gene Length1734 bp 
Protein Length577 aa 
Translation table11 
GC content69% 
IMG OID637708773 
Productpeptidoglycan synthetase FtsI 
Protein accessionYP_313871 
Protein GI74316131 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0768] Cell division protein FtsI/penicillin-binding protein 2 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.483173 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0772929 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAACTATC ACTCGCGCAG GCTGCTCCGG CTGAATCTCG CCCCCTGGCG CATGGCGACC 
GTGGCGGGCC TGCTGCTCGC CGGTCTGACC GTGGTCGGCG GGCGCGCGTT CTACCTGCAA
GGCCTCAACA CCGACTACCT GCAGGGAAAG GGGGACGCGG TCGCCAACCG CCAACTCACC
CTGCCGGCGC AGCGCGGCCA GGTTGCGGAC CGCCACGGCC AGTTGCTCGC GATCAGCACG
CCGGTCGAGT CGCTGTGGGC GCGTCCGACC GAGTTGCGCC TCGACGACGC CCAGCGGGCC
CAGCTCGCCC GCGTGCTCGG CGTGTCGCCG CAGGCGCTGG CGAAGACGCT CGGGCGCAAG
ACCCGCGGTG AATTCAGCGT GCGCCGTCCG GTCACCCCCG AGCAGGCCGT GAAAATCGCC
GCGATGGGGA TCCCGGGCCT GCACCTGCGG CGAGAATTCC GCCGCTATTA CCCGGCCGGC
GAAGTCGCCG CCCACGTCGT CGGCTTCACC AACGTCGACG ATCTCGGACA GGAAGGCGTC
GAGCGTGCCT ATCAGGACTG GCTCGCCGGG CGCGAAGGCA AACGCGAGAT CCTGCGCGAC
CGACGCGGCA ACACCATCCG CGACCTCGCG CCGATCAAGA CCGCGCAGAT GGGCGGAAAT
CTTGCGCTCG CGCTCGACCT CAAGATCCAG TATCTCGCAC ACCGCGAACT CGCCGCGGCG
ATCGAGGCAC ACAAGGCCAA GGGCGGCAGC GTCGTCGTGC TCGACGCCAA GACCGGCGAG
ATTCTGGCCC TGGCCAACCA GCCGATCTTC AACCCGAACA ACCGGCACGA CTATGCTCCC
GGTCCGATGC GCAATCGCGC CGTGATCGAC ACCTTCGAGC CGGGCTCGAC GATCAAGCCC
TTCGTCGCCG CCGCCGTGCT CGAGCGCGGC CTGTACGATC CCGACAGCGT CATCGACACG
CCGGAGACCT GGCGCGTTGG CCGCAAGCTC GTGCGCGACG TGCACCCGCA TCCGCAGATG
ACGGTGAGCG AGATCATCCA GAAGTCGAGC AACGTCGGCG CGGTCAAGCT CGCGATGTCG
TTGACGCCGC AGCAATACTG GGAGGTGCTG CATCGTGCGG GGTTCGGCGA ACGGCCGGGC
TCGGGCTTCC CCGGCGAGAC GGCCGGACGC TTGCGCGACG CCGCGAACTG GAAGCCGGTC
GAGCACGCGA CCATGGCGTA CGGCTACGGC CTTTCGGTCA GCCTGCTGCA GCTGACCCGC
GCCTACATGG CGTTCGCCAA CGACGGCGAG GTGATGCCCT TGTCGTTCCT CAAGCGCGAG
CCGCAGGAAA TTGTCGGCGT GCGCGTGTTT TCGCCGACCG TCGCCCGCGA AGTCCGCGCG
ATGATGGAAG CCGTCACGCA GGAAGGCGGC ACCGGTCTGC GCACGCGCGT GCCCGGCTAC
CGCGTCGCAG GCAAGACCGG CACCGCGCAC AAGCTGGTCG ACGGCCGCTA CGCACCGGAC
CGCTATCTGT CGTCCTTCGT CGGCATGGCG CCCGCGTCGA ATCCGCGGCT CATCATCGGC
GTGGTGATCG ACGAGCCGTC CGGCGGCGTC TATTACGGCG GCAGCGTCGC CGGTCCGGTT
TTCGCCCAAG TCATGGCGGC TAGCCTGCGT CAGCTCGCGC TTCCTCCCGA CGCGCCGGAG
ACCGCGACCC ACCTTACGCA CAATGTGCGC CCCGCACGTG GAGGCGGTGC GTGA
 
Protein sequence
MNYHSRRLLR LNLAPWRMAT VAGLLLAGLT VVGGRAFYLQ GLNTDYLQGK GDAVANRQLT 
LPAQRGQVAD RHGQLLAIST PVESLWARPT ELRLDDAQRA QLARVLGVSP QALAKTLGRK
TRGEFSVRRP VTPEQAVKIA AMGIPGLHLR REFRRYYPAG EVAAHVVGFT NVDDLGQEGV
ERAYQDWLAG REGKREILRD RRGNTIRDLA PIKTAQMGGN LALALDLKIQ YLAHRELAAA
IEAHKAKGGS VVVLDAKTGE ILALANQPIF NPNNRHDYAP GPMRNRAVID TFEPGSTIKP
FVAAAVLERG LYDPDSVIDT PETWRVGRKL VRDVHPHPQM TVSEIIQKSS NVGAVKLAMS
LTPQQYWEVL HRAGFGERPG SGFPGETAGR LRDAANWKPV EHATMAYGYG LSVSLLQLTR
AYMAFANDGE VMPLSFLKRE PQEIVGVRVF SPTVAREVRA MMEAVTQEGG TGLRTRVPGY
RVAGKTGTAH KLVDGRYAPD RYLSSFVGMA PASNPRLIIG VVIDEPSGGV YYGGSVAGPV
FAQVMAASLR QLALPPDAPE TATHLTHNVR PARGGGA