Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Tbd_0097 |
Symbol | |
ID | 3673875 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Thiobacillus denitrificans ATCC 25259 |
Kingdom | Bacteria |
Replicon accession | NC_007404 |
Strand | - |
Start bp | 103358 |
End bp | 104245 |
Gene Length | 888 bp |
Protein Length | 295 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 637708757 |
Product | serine protease |
Protein accession | YP_313855 |
Protein GI | 74316115 |
COG category | [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG0265] Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 0.222213 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 11 |
Fosmid unclonability p-value | 0.251032 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAATAGAC TGTCCCTGCT GCCGCCCGGA TTGTATCGAA TTTGCCCGCG CCTTCCGCGA CGGCCTGCGC GCCGGGCTGG ACGATGGGCG AGCAAGCTGC ATTCCAGCGT CGCGCTGATC CTGCTCGCGA CCGCGCTCCC GGTCGAGGCC GACGTGGCCG ACACGGTCGC CAAGGTCAAG CCCGCCGTCG TCGGCGTCGG CACCTTCCAG CCGACGGGCC GGCCGCGCGC CAACCTGCTC GGCACCGGTT TCGCCGTGCT CGACGGCCGC CACGTCGTGT CGTGCGCGCA CATTTTCGCC AAGCCGCTCG ACACCGAGAA AAAAGCCGTC CACGCCGTTT TCATCGGCCG CGACCGGCAG ATGGCGGTGC GCAGCGCCCG CCTCGTCGCG ACCGACAGCG CGCGCGATCT CGCCCTGCTC CGGATCGACG GCGCCCCGCT GCCGACCCTC AAGCTCGGCG ACTCGGCGCG CGCACGCGAA GGCTGGCAAC TCTACTTCAC CGGCTATCCG ATCGGTTCCA TACTCGGGCT CAACGCCTCG ACCCATCGCG CCGGGCTCGC CGCGATCGTT CCGATATTCA CGCCGATGCA AAGTGCCGAC CAGCTCAATG CGCGCACCCT GAAGCAGGCG CGCGACGCCT ACGAGGTATT CGAGCTCGAC GCGATCGCCT ACCCCGGAAA CAGCGGCAGC CCGGTCTGGC ACCCGGAGAC GGGGGAGGTG CTCGGCGTGC TCAATTCGGT CTACGTCAAA GGCGCGAAGG AAGCCGCGCT GTCGACGCCG AGCGGCATCA GCTACGCGAT TCCGGTGAGC TACGTGCACG CGCTGCTGAA GCGCGCCGCG CTCGACGCAG CCGAGCCCAA CGCATCCGAG CCCAACGCAT CCGAGTAG
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Protein sequence | MNRLSLLPPG LYRICPRLPR RPARRAGRWA SKLHSSVALI LLATALPVEA DVADTVAKVK PAVVGVGTFQ PTGRPRANLL GTGFAVLDGR HVVSCAHIFA KPLDTEKKAV HAVFIGRDRQ MAVRSARLVA TDSARDLALL RIDGAPLPTL KLGDSARARE GWQLYFTGYP IGSILGLNAS THRAGLAAIV PIFTPMQSAD QLNARTLKQA RDAYEVFELD AIAYPGNSGS PVWHPETGEV LGVLNSVYVK GAKEAALSTP SGISYAIPVS YVHALLKRAA LDAAEPNASE PNASE
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