| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tbd_0089 |
|---|
| Symbol | |
|---|
| ID | 3673867 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Thiobacillus denitrificans ATCC 25259 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007404 |
|---|
| Strand | - |
|---|
| Start bp | 93724 |
|---|
| End bp | 94425 |
|---|
| Gene Length | 702 bp |
|---|
| Protein Length | 233 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 69% |
|---|
| IMG OID | 637708749 |
|---|
| Product | exonuclease |
|---|
| Protein accession | YP_313847 |
|---|
| Protein GI | 74316107 |
|---|
| COG category | [L] Replication, recombination and repair |
|---|
| COG ID | [COG0847] DNA polymerase III, epsilon subunit and related 3'-5' exonucleases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 28 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 11 |
|---|
| Fosmid unclonability p-value | 0.289343 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAACTGGC TGGCGCCTCG CTTCGGCAGA AAACCGGAAC TCTCGCCGCA GCAGGCCGCG
CGTCTGGCCG CCTGGCGCGC GCTGCCGTCG CCGCGCCACG ATCTGCCCCT CGACGAGGGC
CGCTGCGTGG TGGTCGACGT CGAAACGAGC GGACTCGACC CTCGCCGCGA TCGCCTGATC
GCGATCGGCG CGGTCGCCGT CTCCCGAGGC AAGGTGCAGC TCGGCGACAG CCTCGAAATC
GTGCTGCAAC AGGACACCGT CAGCGAGAAG GGCAACATCC TGATCCACGG CATCGGCGGC
ACGGCGCAGC GCGCGGGCGT GCCGCCCGCC GACGCCTTGC TCGCCTTTCT CGAATACCTC
GGCAAGGACC CGCTCGTCGC CTTCCATGTC GCCTTCGACG CGCCGATGAT CCGCCGTGCG
ATGAAAGCCT TTCTCGGGCT CGATTTCAGC CACGCCTGGG CCGACCTGGC CTACGTTGCG
CCGGCGCTCT ACCCGCGGCT CGCCCGGCGG CGCCGCAGTC TCGACGACTG GATGAGCGAA
TTCAAAATCG GCAACTACGC GCGCCATAAC GCGCTGGCCG ACGCCCTCTC CACCGCGCAG
TTGCTGCTCG CCCTGCGCAA GGCGCTCGAT GCCCGCGGAA GCGCGAGCTT TGCCGGCCTC
AAGGACCTCG AGTACACGCA GCGCCGCCAG TCCGGTTTCT GA
|
|---|
| Protein sequence | MNWLAPRFGR KPELSPQQAA RLAAWRALPS PRHDLPLDEG RCVVVDVETS GLDPRRDRLI
AIGAVAVSRG KVQLGDSLEI VLQQDTVSEK GNILIHGIGG TAQRAGVPPA DALLAFLEYL
GKDPLVAFHV AFDAPMIRRA MKAFLGLDFS HAWADLAYVA PALYPRLARR RRSLDDWMSE
FKIGNYARHN ALADALSTAQ LLLALRKALD ARGSASFAGL KDLEYTQRRQ SGF
|
|---|
| |