Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Tbd_0050 |
Symbol | |
ID | 3674070 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Thiobacillus denitrificans ATCC 25259 |
Kingdom | Bacteria |
Replicon accession | NC_007404 |
Strand | + |
Start bp | 52821 |
End bp | 53594 |
Gene Length | 774 bp |
Protein Length | 257 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | 637708709 |
Product | IclR family transcriptional regulator |
Protein accession | YP_313808 |
Protein GI | 74316068 |
COG category | [K] Transcription |
COG ID | [COG1414] Transcriptional regulator |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 27 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 14 |
Fosmid unclonability p-value | 0.676674 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAAAAAG TACAGTCTTC GATACAGGTG CTCGACCGCG CGATGGGCTT AATCGGCGCG CTCGCCTCCG GTCGCGGCCC GACGGCGCTG ACGCGTCTCG CCGAACAGGC CGAACTGCAT ACCTCGAGCG CCCACCGCAT CCTCGCGGCG CTCGCTGCAC ACGGGCTGGT CGAGAAAACC GGCGCAGGAG AATACGAGCT CGGCGTGCGC TGGCTCGAAG TCGGCAATCG GCTCCGTGCG CGGCTGAACA TCCGCCAGGT CGCGCTGCCG TTCATGCAGC GCCTCGCCGA AACGACCGGT GAAACGGTCA ACTTGATCGT GCGCCGCGGC GACGAGGCGG TCTATGTCGA GCGGGTGTCG GGGGGGCAGA CGCTGATCCA GGTCGTGCAG GTCGTCGGCG CGCACGCGCC GCTGCACGTC ACGGCGGTCG GCAAGATCTT CCTCGCCGAG GACAGCGCGA GCGGCGTCAT GGGTTACGCC GAGCGCACCA GGCTTCCCGC GTACACGCCC AATACGCTGG TCACGCTCGA GAAGCTGCGG CGCGAGCTCG ACGTGATCCG CGCGGAACAG CTCGCCCTTG ACCGCGAGGA GGCCGAACTC GGCGTCGCCT GCATCGGCGC GCCGATCCGC GACGCCGAGG GCAAGCTCGT CGCCGGCCTG TCGATCTCGG CCCCCGCGGA CCGTCACAAG CCGGAATGGG CCGCGCTGCT GGGAACCGCC GCGGCCGGGA TCGGCGCGTC GCTCGGCTAT GACGCCGGCA CCGAGCGTCG GTAG
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Protein sequence | MKKVQSSIQV LDRAMGLIGA LASGRGPTAL TRLAEQAELH TSSAHRILAA LAAHGLVEKT GAGEYELGVR WLEVGNRLRA RLNIRQVALP FMQRLAETTG ETVNLIVRRG DEAVYVERVS GGQTLIQVVQ VVGAHAPLHV TAVGKIFLAE DSASGVMGYA ERTRLPAYTP NTLVTLEKLR RELDVIRAEQ LALDREEAEL GVACIGAPIR DAEGKLVAGL SISAPADRHK PEWAALLGTA AAGIGASLGY DAGTERR
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