Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Tbd_0049 |
Symbol | |
ID | 3672336 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Thiobacillus denitrificans ATCC 25259 |
Kingdom | Bacteria |
Replicon accession | NC_007404 |
Strand | - |
Start bp | 50491 |
End bp | 52728 |
Gene Length | 2238 bp |
Protein Length | 745 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 637708708 |
Product | hypothetical protein |
Protein accession | YP_313807 |
Protein GI | 74316067 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG3957] Phosphoketolase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 0.0320211 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 13 |
Fosmid unclonability p-value | 0.595006 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAAGGAG CCGCCGTGAG CGCCCAGTTC CAGCCGACCC CCGAATCCTT CCCGCCCTTC TGCGAGGGGA TCCAGTATTT CGCCGACAGC TTCCCCGAAT TCGACCGCCT CGGAGCCGCG CCGCTGCTCG GCTCCGGCCA GCCCGCGTTG CCCGACGCAA CAAGCGAGGC CGCGATCTAC CAGACGCTGC TCGCCGCCGA CGCGCTGCGC TACCTGACGC TGCAGGTCAC CGGCAGCAAG TCGTCGGGCC ACCCCGGCGG CTTCGCGTCC TCCGCCGACG CCGTCGCCGC GCTGCATCTG CTCGGCCACC GCAACATGGT GACCGAGGTC GGCCACCACG CACCCGGCTT CTATTCGGCA ATGTTCCTCG ACACCTCGCT CGAGGCGATG GGGATCACGA CCGTTGCCGA GATGCGTGCG CGCTTCCGCG AGCGTCACGG CCTGCTCGGT CACCTCTCGG GCGCGATTCC GGGTCTGTTG GCCCCCGCAG GCCCCTTGGG CCAGGGCCAG CATTTCGCGC TCGCCGGCGC CTACCTGTAT CGCGACACGC TCTTCCCGGT GACGATCGGC GACGGCGGCC TCGGCGAGCC CTACATCATG AGCGCGTTCC AGCATTTCGC GACCGCCTAC CCCGATGTGA CCAATTACCT GCCGGTGCTG GTGTGGAATG GCTACTCGCA GGAGCACCAC AGCATGGTGT CACTGTGGGA CAACGAACAG ATGATCGCGT ACTGGCGCGC GCATGGGTTT GATGAAGTGC ACCTGATCGA CGCGCGCGAC TACGGCGGCG CGAACGCGCC GGTCTACGCC GACAGCACGA CGTTCGACTT CAAGCAGCGC ATGGCCTTCA CCGGCGCCGT GCTTGCGGCC GCCGACGCGG CCGCGAAATC CGCGCTCTCG GGCCGCCGTG CCTGCCTCAT CGTCAAGCAG CTGAAGGGCG CGGGCGTGCA TGCGACCGGC GCCAAGTCGC ACAACCTCTA TGCGCACCAC ACGCTCGACT CCGACGACGT CAAAGGCGGC CTGCAACGCC GCGCGCTGCC GATCAAGGCA TGGGAACTCG TGCGCGAGAA CTTCCGCCAC GCCGGCGGCG GCCCGGCCGC CAAGGTCGCG GTGACCGAAA ACGTTCGCGC ACTGCCGAGT CTCGATGGGC TTGCGCTAAC CGAATTCGCG GTGGGCGAGA GCCACATCCC CACCACCGCG TTCGGCCTCG TGGTCGGCGA AGTCGGCAAG CGCGACCCGC ACTTCGTCGT CACCAACGCC GACGGCAACG AGGCGTCTGG CATGGCCAAC ATCAACAAGG CGCTGACGAT CCGCCATCCG ACCGCCGACG ACCTCTACTT CCAGGGCCCG TCGGGCCAGG TCTACGAGCC GCTCAACGAA GACGCTTGCG CGGGGCTTGC CGTCGGCGTT GCGCTCTTCG GCGGACGCAG CCTGTGGTGC AGCTACGAGT CGTTCGCGAT CAACGGCCTG CCGATCTGGC AGACGGTGAC GCAGGCGATG GCCGAGCTGC GGCGCCCGAC GCCGGCGACG GTGTGCCTGT TCACCGCCGG TGCGCTCGAG CAGGGCCGCA ACGGCTGGAC CCACCAGCGC CCCGAGATCG AGAACTACTT CGCGGCGATG ATGCGCAACG GCAACGTCTA TCCGCTCTTC CCGGTCGACG CCAACATGAT CCAGGCGAGC TACGACTGGG CCTTGAAGCA GACCAACAAA GGCGTCGTGA TCACCGCGTC GAAGTCGCCG CTGACTATTC ACACGACGCT CGCGCAAAGC CGTCAGGCGA TCGACGACGG CGCAATCGTA TTGAAGGAAC ACAAGGGGTC GCACACGGTC GTGTTCGCGG TCGCCGGCGA CCTCGTACTG CAGCCCGTGC TCGCCGCGGC CGAGAAGCTC GCCGAAACCG GTATCGGCTC GCGCATCGTC GCCGTGGTCA ATCCGCGCCG GCTGTATCGT CCGACCGACG TACTGTGGGA CAGCGTCTCC GAGCCCGACG GGCGCTTCAT GGACGACGAG GCCTTCCGTG CCCTGTTCGA CGGCGACGTA CTGATCGGCG TGAGCGGCGG TCCCTCGGCG CCGCTCGAGC CGGTGTTGCT GCGCAGCCGC GCCGGCGAGC GTGAAGTGTT CTGCTGGAAG CGCGGCGAGA CCACCGCCAA CCCGCAGCAG CTGTTCGACT TCAACGGCAT GAACGCGCAG GCGATGGGCG AGCGCGCGAT GGCCCTGCTC GAGCGCGCCG CGGGCTGA
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Protein sequence | MKGAAVSAQF QPTPESFPPF CEGIQYFADS FPEFDRLGAA PLLGSGQPAL PDATSEAAIY QTLLAADALR YLTLQVTGSK SSGHPGGFAS SADAVAALHL LGHRNMVTEV GHHAPGFYSA MFLDTSLEAM GITTVAEMRA RFRERHGLLG HLSGAIPGLL APAGPLGQGQ HFALAGAYLY RDTLFPVTIG DGGLGEPYIM SAFQHFATAY PDVTNYLPVL VWNGYSQEHH SMVSLWDNEQ MIAYWRAHGF DEVHLIDARD YGGANAPVYA DSTTFDFKQR MAFTGAVLAA ADAAAKSALS GRRACLIVKQ LKGAGVHATG AKSHNLYAHH TLDSDDVKGG LQRRALPIKA WELVRENFRH AGGGPAAKVA VTENVRALPS LDGLALTEFA VGESHIPTTA FGLVVGEVGK RDPHFVVTNA DGNEASGMAN INKALTIRHP TADDLYFQGP SGQVYEPLNE DACAGLAVGV ALFGGRSLWC SYESFAINGL PIWQTVTQAM AELRRPTPAT VCLFTAGALE QGRNGWTHQR PEIENYFAAM MRNGNVYPLF PVDANMIQAS YDWALKQTNK GVVITASKSP LTIHTTLAQS RQAIDDGAIV LKEHKGSHTV VFAVAGDLVL QPVLAAAEKL AETGIGSRIV AVVNPRRLYR PTDVLWDSVS EPDGRFMDDE AFRALFDGDV LIGVSGGPSA PLEPVLLRSR AGEREVFCWK RGETTANPQQ LFDFNGMNAQ AMGERAMALL ERAAG
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