| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mbar_A3689 |
|---|
| Symbol | nusA |
|---|
| ID | 3624633 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methanosarcina barkeri str. Fusaro |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_007355 |
|---|
| Strand | - |
|---|
| Start bp | 4750604 |
|---|
| End bp | 4751029 |
|---|
| Gene Length | 426 bp |
|---|
| Protein Length | 141 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 40% |
|---|
| IMG OID | 637702521 |
|---|
| Product | transcription elongation factor NusA-like protein |
|---|
| Protein accession | YP_307132 |
|---|
| Protein GI | 73671117 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG0195] Transcription elongation factor |
|---|
| TIGRFAM ID | [TIGR01952] NusA family KH domain protein, archaeal |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 40 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 16 |
|---|
| Fosmid unclonability p-value | 0.167967 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | TTGGGTGAAA TAAGACTTAC TGCAGAAAGC ATCCAGTACA TTGCGTTATT TGAAAATATG
ACAAGAGCTA AAATCCTCGA CTGTATTCCT GAAGAGGAAA GGCTCGTATA TGTCGTAAAA
CAGGGTGATA TGGGACTTGC TATAGGCAGA AATGGGGAGA ATATAAACCG TGTTAAAAAG
GCTCTGGACA AACCAATTGA ACTTGTGGAA TATTCAGATG AACCTGTCAC CTTTTTGAAG
AACGCCTTCG GACCTGTGTC CGTGAGTTCA GTAAACATTA TAAACAAAAA TGGCAAGCGA
TTAGCTTATG TAGAGGTACC CAATAAAGAG AAGGGGCTTG CCATAGGCCG TAATGGTAAA
AATATAGAAA AAGTAAAGAT GCTTGCCCGT CGTCATCACA ATATAGAAGA TGTGATCCTG
CAGTAA
|
|---|
| Protein sequence | MGEIRLTAES IQYIALFENM TRAKILDCIP EEERLVYVVK QGDMGLAIGR NGENINRVKK
ALDKPIELVE YSDEPVTFLK NAFGPVSVSS VNIINKNGKR LAYVEVPNKE KGLAIGRNGK
NIEKVKMLAR RHHNIEDVIL Q
|
|---|
| |