| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mbar_A3678 |
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| Symbol | |
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| ID | 3624622 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Methanosarcina barkeri str. Fusaro |
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| Kingdom | Archaea |
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| Replicon accession | NC_007355 |
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| Strand | - |
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| Start bp | 4736329 |
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| End bp | 4737906 |
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| Gene Length | 1578 bp |
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| Protein Length | 525 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 637702510 |
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| Product | oligopeptide ABC transporter, oligopeptide-binding protein |
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| Protein accession | YP_307121 |
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| Protein GI | 73671106 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0747] ABC-type dipeptide transport system, periplasmic component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 0.0885273 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGTGAAAT TCAACTTTTC AAAAATAAAA CTATCCATCT CTGCCATTGC CGTTATTATG
ATTGTAGCGC TGCTCTGTGC AGGATGTGTT GATACTGGAG AGGCGTCTAA TGAAAAAGTT
CTTCGTGTAG TTTTTAACGA AGGGCCCGAT ACCGGCGGCA GTCTTGATCC TGCCAACGGC
TGGACAGGGT GGTATGTCCA TCAGGCAGGC ATCTATGAAA CCCTGTTCTA CTATGACGCA
GACATGAATC TCATGCCCAA ACTCGCATCC GGATACAATC AGTTAAACGA TACCGAATGG
GAAATCCAGC TTCGTAAGAA TGTAACCTTC CATGACGGGA CAAAAATGGA TGCGGATGCG
GTTTTATTTT CACTGAACCG AGTGCTTGAC CCATCAAACA GCAGATCATC CGAGTACTCC
TTCATCAAAG ATGTACAAAA AACCGGGGAT TACACCATTG TTATTGAAAC CAATGGCACT
TGCGCTCCAC TAATTTCATC CCTTGTAGAC CCTATCATGT CCATTGTAAG TCCTAAAGCC
AGTGATCTCG ACAAAGAGCC GGTTGGGACC GGGCCCTTCA AGTTTGTGTC CTTCGAACCG
AGTACAAGCC TTGAACTCGA AAAGAATCCT GATTACTGGG GCGGGGAAGC AAAAGTTGAC
CGCGTACTCA TACAGTATAA TAAAGACAGC ACGGCCAGAA CCATGCTGAT AAAATCCGGA
GATGTAGATA TTGCCAGAGA CCCACTCCAG AGTGAGTATT CAGCACTTAA GAATAATCCT
GATATAAGCG TCACTTCCAA AGAAACATTG CGTACGTACT TCCTTTATGT AAATGGCGGA
AAAGCTCCAT TCAATGACAC CAGAGTCCGC CAGGGCCTTT CTTATGCGAT CAACCGCCAG
GAAATCGTGG ATACAGCACT TGAAGGAGTC TCCGGCATCC CGGCAACGGG AGTATTCACA
AATACCATGC CCTGGAACGC AAATGACCAG ATTAAGTCCT ATGAATATAA CCCTGAGAAA
GCTCTGGAAC TCTTCGAAGA AGCAGGAATC ACGAAAGGCA CAGATGGTAA GCTGTACTAC
AACGGGAACC CCTTCACCGT TGAAATCCAG ACCTACACAA AACGTGCAGC TCTTCAGCCG
AGTGCGGAAG TAATCGCTTC AGAGCTGGAA GACATTGGCA TCACCTCAAA GGTCACAATT
CTGGAAAGTG CCGCACTTAA AGAAAATGCT CTTGCAGGAA CATATGATTT ATCTCTCAGT
GCATGGAACA CGGCCCCGAT CGGAGATCCC GATTACTTCC TCTCAACCCA TTTCCTCTCT
ACCGGAAGCT ATGCATCAGG CTGGCTTCGC TATTCAAACC CTCAGGTAGA CGAATGGATT
CTCGAAGCAA GAAACGAACC TGACAAAGAT AAACGGGCCG AAATATATGA TAAGATCCAG
GAACAGATTC AGGAAGATGC ACCAGTACTG CCAGTTTTCT ATGCCAACGA AATTTATGCC
CTGTCCTCGA ATGTTGAAGG CTTTGTGATG TATCCAAACG AGTATACAAT CATCACCAAG
GACATCGGAT TTGCATAA
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| Protein sequence | MVKFNFSKIK LSISAIAVIM IVALLCAGCV DTGEASNEKV LRVVFNEGPD TGGSLDPANG
WTGWYVHQAG IYETLFYYDA DMNLMPKLAS GYNQLNDTEW EIQLRKNVTF HDGTKMDADA
VLFSLNRVLD PSNSRSSEYS FIKDVQKTGD YTIVIETNGT CAPLISSLVD PIMSIVSPKA
SDLDKEPVGT GPFKFVSFEP STSLELEKNP DYWGGEAKVD RVLIQYNKDS TARTMLIKSG
DVDIARDPLQ SEYSALKNNP DISVTSKETL RTYFLYVNGG KAPFNDTRVR QGLSYAINRQ
EIVDTALEGV SGIPATGVFT NTMPWNANDQ IKSYEYNPEK ALELFEEAGI TKGTDGKLYY
NGNPFTVEIQ TYTKRAALQP SAEVIASELE DIGITSKVTI LESAALKENA LAGTYDLSLS
AWNTAPIGDP DYFLSTHFLS TGSYASGWLR YSNPQVDEWI LEARNEPDKD KRAEIYDKIQ
EQIQEDAPVL PVFYANEIYA LSSNVEGFVM YPNEYTIITK DIGFA
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