Gene Mbar_A3671 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMbar_A3671 
Symbol 
ID3624615 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethanosarcina barkeri str. Fusaro 
KingdomArchaea 
Replicon accessionNC_007355 
Strand
Start bp4729092 
End bp4729490 
Gene Length399 bp 
Protein Length132 aa 
Translation table11 
GC content45% 
IMG OID637702503 
Productcarboxymuconolactone decarboxylase 
Protein accessionYP_307114 
Protein GI73671099 
COG category[S] Function unknown 
COG ID[COG0599] Uncharacterized homolog of gamma-carboxymuconolactone decarboxylase subunit 
TIGRFAM ID[TIGR00778] alkylhydroperoxidase AhpD family core domain 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value0.0429086 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGGAGAAC ATGGGGAAGG AAGTCATGAA AGACATCACG AAGAGCACGG AGAGTTTGAA 
CACGAAGAGT TACTGAAAAG TATGAGCGAG AAACTGGGTT TTACCCCGCA CATTCTTGAG
ATCCTTGGAG AACTTGACAG TGAATCCCTT AAAAAATATA GCAGATGCGA CAAAAAACTA
CTGTCGGACG GCGCTCTACC TGCAAAGGTG AAAATCCTTA TCGCGCTTGC TGTTGTTGCA
TCCAAGCAGT GTGAAAGGTG TACGGTTGTG CAGATGCAGA GTGCACTCAA GAATGGAGCC
ACCAAAGAAG AAATAATGGA AGTTATGGAT GTCATATTCA TAACCTCAGG GGCACCTGCG
GTAGCAGCTT GCAGAGATGC GTTAAAACTG CTAAAGTAA
 
Protein sequence
MGEHGEGSHE RHHEEHGEFE HEELLKSMSE KLGFTPHILE ILGELDSESL KKYSRCDKKL 
LSDGALPAKV KILIALAVVA SKQCERCTVV QMQSALKNGA TKEEIMEVMD VIFITSGAPA
VAACRDALKL LK