Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mbar_A3600 |
Symbol | |
ID | 3626744 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Methanosarcina barkeri str. Fusaro |
Kingdom | Archaea |
Replicon accession | NC_007355 |
Strand | - |
Start bp | 4619860 |
End bp | 4620678 |
Gene Length | 819 bp |
Protein Length | 272 aa |
Translation table | 11 |
GC content | 46% |
IMG OID | 637702433 |
Product | hypothetical protein |
Protein accession | YP_307048 |
Protein GI | 73671033 |
COG category | [O] Posttranslational modification, protein turnover, chaperones [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG0616] Periplasmic serine proteases (ClpP class) |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 0.354038 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 11 |
Fosmid unclonability p-value | 0.0141904 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCCCTTT TATTTGTACT TCTGTTTCTC TATGCAGTAA TCTACCCGCA GTCGCAGCTA AAACAAATCC GGTTGCGGCG CATGGCAAAA CTAAAAGCTA TGGAAAAAAG CCACGGCTGC AAGGTGCTCA CTATGATTCA CAGGCGGGAG GCAATCTCTC TTTTCGGGAT ACCAGCTTAT CAGTACATAG ATGAGGAAGA CGCCGAGCAG ATCCTGCGCT GGATAAGAAA ATACAAAGAC TACCCTCTTG AGCTGATTCT GCACACGCCA GGCGGACAGC TTCATTCTAG CATCCAGATT GCACGTGCCC TACGGCGGCA CTCGAAAAAC ACTAAAGTTA TTATCCCGCA CTACTCGATG TCAGGAGGCA CAATTATCGC CCTTGCAGCA AATGAAATCG TGATGGACAG AGATGCAGTT ATCGGGCCAA TTGATCCCCA GATAGGAGAT TTTATTCGTG GGATGTACCC TGCTCCCTCC TGGATATATG CTGCAGAAAC AAAAAAAGAA AAAGCCGATG ATACCACCCT TGTTATGAGT GATGTCTCAA GAAAAGCCCT CAAATTCACC AGAAATGTTG CAAAAGAGCT TCTTGAAGGC AAAATCCAGC CAGGGCCGGC TGGGGAAAGT AGGCTAGATG AAGTGGTTGA AAAACTGGTC AGCGGAGAAA TGATTCACAG CACACCCTTA TCAGCCGGCG AGGCAAAAAA AATAGGGCTT TCCATAAGTA CGGATTTTCC GCAGGATGTG CATGAGTTTA TGAAACTTTT CAAGCCTGTA AAAAGGAGTG TGGAATCTGT GGAATCAAGT TCTTCATAA
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Protein sequence | MSLLFVLLFL YAVIYPQSQL KQIRLRRMAK LKAMEKSHGC KVLTMIHRRE AISLFGIPAY QYIDEEDAEQ ILRWIRKYKD YPLELILHTP GGQLHSSIQI ARALRRHSKN TKVIIPHYSM SGGTIIALAA NEIVMDRDAV IGPIDPQIGD FIRGMYPAPS WIYAAETKKE KADDTTLVMS DVSRKALKFT RNVAKELLEG KIQPGPAGES RLDEVVEKLV SGEMIHSTPL SAGEAKKIGL SISTDFPQDV HEFMKLFKPV KRSVESVESS SS
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