Gene Mbar_A3600 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMbar_A3600 
Symbol 
ID3626744 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethanosarcina barkeri str. Fusaro 
KingdomArchaea 
Replicon accessionNC_007355 
Strand
Start bp4619860 
End bp4620678 
Gene Length819 bp 
Protein Length272 aa 
Translation table11 
GC content46% 
IMG OID637702433 
Producthypothetical protein 
Protein accessionYP_307048 
Protein GI73671033 
COG category[O] Posttranslational modification, protein turnover, chaperones
[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG0616] Periplasmic serine proteases (ClpP class) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value0.354038 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones11 
Fosmid unclonability p-value0.0141904 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCCCTTT TATTTGTACT TCTGTTTCTC TATGCAGTAA TCTACCCGCA GTCGCAGCTA 
AAACAAATCC GGTTGCGGCG CATGGCAAAA CTAAAAGCTA TGGAAAAAAG CCACGGCTGC
AAGGTGCTCA CTATGATTCA CAGGCGGGAG GCAATCTCTC TTTTCGGGAT ACCAGCTTAT
CAGTACATAG ATGAGGAAGA CGCCGAGCAG ATCCTGCGCT GGATAAGAAA ATACAAAGAC
TACCCTCTTG AGCTGATTCT GCACACGCCA GGCGGACAGC TTCATTCTAG CATCCAGATT
GCACGTGCCC TACGGCGGCA CTCGAAAAAC ACTAAAGTTA TTATCCCGCA CTACTCGATG
TCAGGAGGCA CAATTATCGC CCTTGCAGCA AATGAAATCG TGATGGACAG AGATGCAGTT
ATCGGGCCAA TTGATCCCCA GATAGGAGAT TTTATTCGTG GGATGTACCC TGCTCCCTCC
TGGATATATG CTGCAGAAAC AAAAAAAGAA AAAGCCGATG ATACCACCCT TGTTATGAGT
GATGTCTCAA GAAAAGCCCT CAAATTCACC AGAAATGTTG CAAAAGAGCT TCTTGAAGGC
AAAATCCAGC CAGGGCCGGC TGGGGAAAGT AGGCTAGATG AAGTGGTTGA AAAACTGGTC
AGCGGAGAAA TGATTCACAG CACACCCTTA TCAGCCGGCG AGGCAAAAAA AATAGGGCTT
TCCATAAGTA CGGATTTTCC GCAGGATGTG CATGAGTTTA TGAAACTTTT CAAGCCTGTA
AAAAGGAGTG TGGAATCTGT GGAATCAAGT TCTTCATAA
 
Protein sequence
MSLLFVLLFL YAVIYPQSQL KQIRLRRMAK LKAMEKSHGC KVLTMIHRRE AISLFGIPAY 
QYIDEEDAEQ ILRWIRKYKD YPLELILHTP GGQLHSSIQI ARALRRHSKN TKVIIPHYSM
SGGTIIALAA NEIVMDRDAV IGPIDPQIGD FIRGMYPAPS WIYAAETKKE KADDTTLVMS
DVSRKALKFT RNVAKELLEG KIQPGPAGES RLDEVVEKLV SGEMIHSTPL SAGEAKKIGL
SISTDFPQDV HEFMKLFKPV KRSVESVESS SS