| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mbar_A3581 |
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| Symbol | |
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| ID | 3625805 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Methanosarcina barkeri str. Fusaro |
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| Kingdom | Archaea |
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| Replicon accession | NC_007355 |
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| Strand | - |
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| Start bp | 4595281 |
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| End bp | 4596177 |
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| Gene Length | 897 bp |
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| Protein Length | 298 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | 637702412 |
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| Product | pyridoxal biosynthesis lyase PdxS |
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| Protein accession | YP_307029 |
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| Protein GI | 73671014 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG0214] Pyridoxine biosynthesis enzyme |
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| TIGRFAM ID | [TIGR00343] pyridoxal 5'-phosphate synthase, synthase subunit Pdx1 |
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Plasmid Coverage information |
| Num covering plasmid clones | 29 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 0.073488 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGACTTTG AACAATTAAG ACATGGGACC GAACTTATCA AAAGGGGCTT TGCAAGAATG
CAGAAAGGGG GTGTAATCAT GGATGTTACA AACCCGGAGC AGGCCAGGAT CGCAGAAGAA
GCCGGAGCAG TTGCTGTTAT GGCCCTCCAG GCTGTTCCTG CGGATATCAG AAAAGCGGGT
GGGGTTGCCC GGATGGCCGA CCCTGAGATT GTCCAGCAGA TTATTGATAC GGTTACAATT
CCTGTAATGG CAAAAGCCAG GATCGGGCAC TTTGTCGAAG CCGAAATTTT AGAAGCTCTG
GGTGTTGACA TGGTGGACGA ATCCGAAGTC CTGACCCCTG CTGACCCCTA CTTCCACATA
GACAAAATGC AGTTCACCGT GCCTTTTGTC TGCGGTGCCA GAAACCTTGG AGAAGCCCTA
AGGAGAATTA ACGAAGGGGC AGCCATGATC CGAACTAAAG GAGAGGCTGG AACCGGAGAT
GTCAGCCAGG CAGTTAAGCA CATGAAGCAG ATTCAGGGTG AAATCCGTGC CCTTGCCGGG
AAGACTAAAG AAGAGTTGAT TATGGTTTCA AGGGAAATCG AAGCTCCGAT TGAACTTGTA
GTTGAAACCT CAAAAATGCA GCGTCTGCCT GTGGTAAACT TTGCAGCCGG CGGAGTTGCG
ACCCCTGCAG ATGCCGCTCT TATGATGCGC CTTGGTGCAG ACGGGGTCTT TGTAGGTTCA
GGTATTTTCA AAGCTGAAAA CCCTGAGAAA ATGGCAAAAG CCGTTGTTGA AGCCGTAAAC
AACTTTGACA ACCCTGCAAA GCTTGCAGAG ATCTCAAAAG GTGTAGGTGC CGGTATGAAA
GGCATCAGCG CAGACACGAT TCCTGAACAG GAAGCCCTTC AGGAACGCGG TTGGTAA
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| Protein sequence | MDFEQLRHGT ELIKRGFARM QKGGVIMDVT NPEQARIAEE AGAVAVMALQ AVPADIRKAG
GVARMADPEI VQQIIDTVTI PVMAKARIGH FVEAEILEAL GVDMVDESEV LTPADPYFHI
DKMQFTVPFV CGARNLGEAL RRINEGAAMI RTKGEAGTGD VSQAVKHMKQ IQGEIRALAG
KTKEELIMVS REIEAPIELV VETSKMQRLP VVNFAAGGVA TPADAALMMR LGADGVFVGS
GIFKAENPEK MAKAVVEAVN NFDNPAKLAE ISKGVGAGMK GISADTIPEQ EALQERGW
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