Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mbar_A3549 |
Symbol | |
ID | 3625959 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Methanosarcina barkeri str. Fusaro |
Kingdom | Archaea |
Replicon accession | NC_007355 |
Strand | - |
Start bp | 4554999 |
End bp | 4555397 |
Gene Length | 399 bp |
Protein Length | 132 aa |
Translation table | 11 |
GC content | 42% |
IMG OID | 637702381 |
Product | hypothetical protein |
Protein accession | YP_306998 |
Protein GI | 73670983 |
COG category | [K] Transcription |
COG ID | [COG4738] Predicted transcriptional regulator |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 0.000882166 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | 18 |
Fosmid unclonability p-value | 0.578454 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAAGACT ATGAAGTTAA AGTGCTGGAC GAAAACGACC ACATTTTTAT TGAAACGTTA AGGAATCTTG GGATGTCCAG AAATGTCGCT ACAACTATGG CATATCTTAT GAATGTTGAC GAGGCTTCAT CCCGTGAAAT AGAAATCAGT ACCGGACTAA GACAACCAGA AGTAAGTCTT GCAATGAGGC TGATGCGCAA CCAGTCCTGG GTTAGCGTTC GTTCGGAAAA GAAACCTGGT AAAGGGCGCC CAATAAAGAT CTATGCTCTT GCAGCTCCAG TTGACGAGAT CATCAGTTAT TACGAAGACA AAATTTACAA AGAATCTCAG GCGACCATCT CAGCAATTAA GAAGCTGAAG GTTATGAGTA AAAAGGTGCC TCTTACTCCC TCAAAGTGA
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Protein sequence | MKDYEVKVLD ENDHIFIETL RNLGMSRNVA TTMAYLMNVD EASSREIEIS TGLRQPEVSL AMRLMRNQSW VSVRSEKKPG KGRPIKIYAL AAPVDEIISY YEDKIYKESQ ATISAIKKLK VMSKKVPLTP SK
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