Gene Mbar_A3549 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMbar_A3549 
Symbol 
ID3625959 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethanosarcina barkeri str. Fusaro 
KingdomArchaea 
Replicon accessionNC_007355 
Strand
Start bp4554999 
End bp4555397 
Gene Length399 bp 
Protein Length132 aa 
Translation table11 
GC content42% 
IMG OID637702381 
Producthypothetical protein 
Protein accessionYP_306998 
Protein GI73670983 
COG category[K] Transcription 
COG ID[COG4738] Predicted transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.000882166 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value0.578454 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAGACT ATGAAGTTAA AGTGCTGGAC GAAAACGACC ACATTTTTAT TGAAACGTTA 
AGGAATCTTG GGATGTCCAG AAATGTCGCT ACAACTATGG CATATCTTAT GAATGTTGAC
GAGGCTTCAT CCCGTGAAAT AGAAATCAGT ACCGGACTAA GACAACCAGA AGTAAGTCTT
GCAATGAGGC TGATGCGCAA CCAGTCCTGG GTTAGCGTTC GTTCGGAAAA GAAACCTGGT
AAAGGGCGCC CAATAAAGAT CTATGCTCTT GCAGCTCCAG TTGACGAGAT CATCAGTTAT
TACGAAGACA AAATTTACAA AGAATCTCAG GCGACCATCT CAGCAATTAA GAAGCTGAAG
GTTATGAGTA AAAAGGTGCC TCTTACTCCC TCAAAGTGA
 
Protein sequence
MKDYEVKVLD ENDHIFIETL RNLGMSRNVA TTMAYLMNVD EASSREIEIS TGLRQPEVSL 
AMRLMRNQSW VSVRSEKKPG KGRPIKIYAL AAPVDEIISY YEDKIYKESQ ATISAIKKLK
VMSKKVPLTP SK