Gene Mbar_A3497 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMbar_A3497 
Symbol 
ID3624895 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethanosarcina barkeri str. Fusaro 
KingdomArchaea 
Replicon accessionNC_007355 
Strand
Start bp4487852 
End bp4488265 
Gene Length414 bp 
Protein Length137 aa 
Translation table11 
GC content43% 
IMG OID637702324 
Producthypothetical protein 
Protein accessionYP_306948 
Protein GI73670933 
COG category[S] Function unknown 
COG ID[COG0432] Uncharacterized conserved protein 
TIGRFAM ID[TIGR00149] secondary thiamine-phosphate synthase enzyme 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.0304537 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value0.52791 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGTTTCTA AGATTTTCAC TGTCAGGCGC TATTTGTGTA ATATTATACC TTTCTGCAAC 
CTTTTCATAA TTCATACCTG TGACTTTCCC CACTTTTTCT ATTTGTTTTT CCTCTTCAAA
AACAGGTTCA AACTCCTTTT TGATATCCTC CCTTTCCTGT TTAGCTCTTT TCAGTTCCTC
CATGCATTCT TTAAGCTGCT TCAGTGCTTC ATTCTCAAAC CTGGTGCTGG TTACAGTCAC
GACCGCATAG ATAACAATGC AGATTCCCAT CTCAAAGCAG TACTGCTTGG AGCAAGCGAA
GCCCTGCCTG TTTCGGCAGG AAAGCTTGAG CTCGGGACGT GGCAGAGAAT CTTTTTTGCC
GAAATGGACG GGCCGAGAAG CAGGACAGTT AATGTTACGC TTTTAAAGGC TTAA
 
Protein sequence
MVSKIFTVRR YLCNIIPFCN LFIIHTCDFP HFFYLFFLFK NRFKLLFDIL PFLFSSFQFL 
HAFFKLLQCF ILKPGAGYSH DRIDNNADSH LKAVLLGASE ALPVSAGKLE LGTWQRIFFA
EMDGPRSRTV NVTLLKA