Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mbar_A3493 |
Symbol | |
ID | 3624891 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Methanosarcina barkeri str. Fusaro |
Kingdom | Archaea |
Replicon accession | NC_007355 |
Strand | + |
Start bp | 4480485 |
End bp | 4480943 |
Gene Length | 459 bp |
Protein Length | 152 aa |
Translation table | 11 |
GC content | 38% |
IMG OID | 637702320 |
Product | MarR family transcriptional regulator |
Protein accession | YP_306944 |
Protein GI | 73670929 |
COG category | [K] Transcription |
COG ID | [COG1846] Transcriptional regulators |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.00603959 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | 17 |
Fosmid unclonability p-value | 0.317297 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAGGAAG AAAAGATAAA AGAAACAGTA AAAATCCAGT TTGAGATAAT TAATCTGTTT CAAAAAAATT TTGCTAAAAT ATTTCACAAA CCAGGGGACA ATCCGTATAA CCTCAATAAA AATCAGAATC GAGCGATTAT GATTATTGGG TCAATAGACA ATATTATGCC CACAACCCTG GGAAAATGCC TTGATCTTCA GAAGGGAAGT TTAACAAGCA TGATCGATGC TCTGGAAAGA GAAGGACTTG TCTGCAGGAA AAAAGACCCC CAGGACCGTA GAAAAACCCT TATTTCTCTC ACCGAAAAAG GGAAAGCTTA CAGGGAATGG TTTATAGGAA GACTTGAAGA AAATGTCTCC GAGATTCTCA GAAGGCTGGG TGAAGAGGAT ATCCTTGCAT ACAAGGAGAG CCTGCAAATA ATACTTACAA CACTGAAGAA GATTGATAAT ACTACCTGA
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Protein sequence | MKEEKIKETV KIQFEIINLF QKNFAKIFHK PGDNPYNLNK NQNRAIMIIG SIDNIMPTTL GKCLDLQKGS LTSMIDALER EGLVCRKKDP QDRRKTLISL TEKGKAYREW FIGRLEENVS EILRRLGEED ILAYKESLQI ILTTLKKIDN TT
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