Gene Mbar_A3493 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMbar_A3493 
Symbol 
ID3624891 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethanosarcina barkeri str. Fusaro 
KingdomArchaea 
Replicon accessionNC_007355 
Strand
Start bp4480485 
End bp4480943 
Gene Length459 bp 
Protein Length152 aa 
Translation table11 
GC content38% 
IMG OID637702320 
ProductMarR family transcriptional regulator 
Protein accessionYP_306944 
Protein GI73670929 
COG category[K] Transcription 
COG ID[COG1846] Transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.00603959 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value0.317297 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAGGAAG AAAAGATAAA AGAAACAGTA AAAATCCAGT TTGAGATAAT TAATCTGTTT 
CAAAAAAATT TTGCTAAAAT ATTTCACAAA CCAGGGGACA ATCCGTATAA CCTCAATAAA
AATCAGAATC GAGCGATTAT GATTATTGGG TCAATAGACA ATATTATGCC CACAACCCTG
GGAAAATGCC TTGATCTTCA GAAGGGAAGT TTAACAAGCA TGATCGATGC TCTGGAAAGA
GAAGGACTTG TCTGCAGGAA AAAAGACCCC CAGGACCGTA GAAAAACCCT TATTTCTCTC
ACCGAAAAAG GGAAAGCTTA CAGGGAATGG TTTATAGGAA GACTTGAAGA AAATGTCTCC
GAGATTCTCA GAAGGCTGGG TGAAGAGGAT ATCCTTGCAT ACAAGGAGAG CCTGCAAATA
ATACTTACAA CACTGAAGAA GATTGATAAT ACTACCTGA
 
Protein sequence
MKEEKIKETV KIQFEIINLF QKNFAKIFHK PGDNPYNLNK NQNRAIMIIG SIDNIMPTTL 
GKCLDLQKGS LTSMIDALER EGLVCRKKDP QDRRKTLISL TEKGKAYREW FIGRLEENVS
EILRRLGEED ILAYKESLQI ILTTLKKIDN TT