Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mbar_A3467 |
Symbol | |
ID | 3626440 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Methanosarcina barkeri str. Fusaro |
Kingdom | Archaea |
Replicon accession | NC_007355 |
Strand | + |
Start bp | 4446799 |
End bp | 4447488 |
Gene Length | 690 bp |
Protein Length | 229 aa |
Translation table | 11 |
GC content | 46% |
IMG OID | 637702296 |
Product | hypothetical protein |
Protein accession | YP_306920 |
Protein GI | 73670905 |
COG category | [S] Function unknown |
COG ID | [COG2043] Uncharacterized protein conserved in archaea |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 0.453769 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 9 |
Fosmid unclonability p-value | 0.00174039 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGGATGTAA AAGAGATAAA TAAATATGGA CAAGAACTTG TAGACTGCCT GAAACTGAAG ACTTCTCCTG TTGCAGTAAA GCTGATCCCG AAAGGAGGGG AAATTCCTGA AGGAATGAAA GAAGTAGATG AAGCTATGAG GCACTGCCAG CTGGTTGACA GAGTGAGAAG AACAGGCGAA GAGTTCTATA CCCTTGTCGA AGACCAGATG TGTAAAGGTG GCGCTGGCGC AATGGGCCTT GGCGAAATGC CTCCAAAAGT CGCAAGTGGA GAATTTTATT TTAATAAACT CAAACAGTTC AGCACCCAGG GCGCTGCAAG GCGTACCCTT GAAAGAGTTC CCAAGCTTCC CCCAAAATCA ACAGAAGCTA TCCTGTACTC TCCTCTGGAA AAAGCCACTT TTATCCCCGA TGTTGTTGTG ATTATCGGTA ATCCTAAACA AATAATGCTA CTTACGCAGG CTGCAATGTA CAAAACCGGA GGCAGGGTCG AAGCGAGTTT TGCAGGAAAG CAGAGTCTGT GCTCCGACGG GGTTGTGAAT GTATACAAAG AAGGCAAAAT CGGAGTCACA GTCGGCTGCA GTGGCAGCAG AACATACTCC AAAATCGCAG ACGAAGAAAT GATTATGGGA ATTCCCATTG AACTCCTGGC TGATGTAGCC ACCGGCCTCA AGGAAATTTG CCCAAAGTAA
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Protein sequence | MDVKEINKYG QELVDCLKLK TSPVAVKLIP KGGEIPEGMK EVDEAMRHCQ LVDRVRRTGE EFYTLVEDQM CKGGAGAMGL GEMPPKVASG EFYFNKLKQF STQGAARRTL ERVPKLPPKS TEAILYSPLE KATFIPDVVV IIGNPKQIML LTQAAMYKTG GRVEASFAGK QSLCSDGVVN VYKEGKIGVT VGCSGSRTYS KIADEEMIMG IPIELLADVA TGLKEICPK
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