Gene Mbar_A3467 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMbar_A3467 
Symbol 
ID3626440 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethanosarcina barkeri str. Fusaro 
KingdomArchaea 
Replicon accessionNC_007355 
Strand
Start bp4446799 
End bp4447488 
Gene Length690 bp 
Protein Length229 aa 
Translation table11 
GC content46% 
IMG OID637702296 
Producthypothetical protein 
Protein accessionYP_306920 
Protein GI73670905 
COG category[S] Function unknown 
COG ID[COG2043] Uncharacterized protein conserved in archaea 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value0.453769 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.00174039 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGGATGTAA AAGAGATAAA TAAATATGGA CAAGAACTTG TAGACTGCCT GAAACTGAAG 
ACTTCTCCTG TTGCAGTAAA GCTGATCCCG AAAGGAGGGG AAATTCCTGA AGGAATGAAA
GAAGTAGATG AAGCTATGAG GCACTGCCAG CTGGTTGACA GAGTGAGAAG AACAGGCGAA
GAGTTCTATA CCCTTGTCGA AGACCAGATG TGTAAAGGTG GCGCTGGCGC AATGGGCCTT
GGCGAAATGC CTCCAAAAGT CGCAAGTGGA GAATTTTATT TTAATAAACT CAAACAGTTC
AGCACCCAGG GCGCTGCAAG GCGTACCCTT GAAAGAGTTC CCAAGCTTCC CCCAAAATCA
ACAGAAGCTA TCCTGTACTC TCCTCTGGAA AAAGCCACTT TTATCCCCGA TGTTGTTGTG
ATTATCGGTA ATCCTAAACA AATAATGCTA CTTACGCAGG CTGCAATGTA CAAAACCGGA
GGCAGGGTCG AAGCGAGTTT TGCAGGAAAG CAGAGTCTGT GCTCCGACGG GGTTGTGAAT
GTATACAAAG AAGGCAAAAT CGGAGTCACA GTCGGCTGCA GTGGCAGCAG AACATACTCC
AAAATCGCAG ACGAAGAAAT GATTATGGGA ATTCCCATTG AACTCCTGGC TGATGTAGCC
ACCGGCCTCA AGGAAATTTG CCCAAAGTAA
 
Protein sequence
MDVKEINKYG QELVDCLKLK TSPVAVKLIP KGGEIPEGMK EVDEAMRHCQ LVDRVRRTGE 
EFYTLVEDQM CKGGAGAMGL GEMPPKVASG EFYFNKLKQF STQGAARRTL ERVPKLPPKS
TEAILYSPLE KATFIPDVVV IIGNPKQIML LTQAAMYKTG GRVEASFAGK QSLCSDGVVN
VYKEGKIGVT VGCSGSRTYS KIADEEMIMG IPIELLADVA TGLKEICPK