Gene Mbar_A3464 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMbar_A3464 
Symbol 
ID3626437 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethanosarcina barkeri str. Fusaro 
KingdomArchaea 
Replicon accessionNC_007355 
Strand
Start bp4444226 
End bp4444717 
Gene Length492 bp 
Protein Length163 aa 
Translation table11 
GC content43% 
IMG OID637702293 
ProductAsnC family transcriptional regulator 
Protein accessionYP_306917 
Protein GI73670902 
COG category[K] Transcription 
COG ID[COG1522] Transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones32 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value0.00420636 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGGATGAAA AGATTCGACA TATACTGGAA ATTCTTGAGA ATGATGCACG AACGAGTCCA 
GAAGAAATAG CATCCCTTAC AGATATGTCT GCACAGGATG TTTCCCAGAC GATTGCAAAA
CTTGAAGAGA CGGGAGTTAT CCGGCACTAC AAAACCATCG TTGATTGGGA TCTGGTCGGG
GAAAACGATG TTTATGCCGT TATTGAGCTG AAGGTTACTC TCGAGCGCAA TCAGGGCTAT
CAGGCAATTG CAGAAAGAAT CTACAAGTTT CCGGAAGTCA GGTCAGTTAG GCTCTTATCT
GGAAATTACG ACATATCCCT TACTGTCCGA GGAAAATCGA TGAAGGACGT GGCTTTTTTC
GTAGCAGAGA AAATTGCAAC CCTTGATCAG GTACAGAGCA CTTCAACCCA CTTCGTACTG
AAAACGTATA AAGAAGATGG GGTCATCCTT CATGAACCTG AAACGATTCA AAGGCTACCG
GTATCATTTT GA
 
Protein sequence
MDEKIRHILE ILENDARTSP EEIASLTDMS AQDVSQTIAK LEETGVIRHY KTIVDWDLVG 
ENDVYAVIEL KVTLERNQGY QAIAERIYKF PEVRSVRLLS GNYDISLTVR GKSMKDVAFF
VAEKIATLDQ VQSTSTHFVL KTYKEDGVIL HEPETIQRLP VSF